AE Appendix

This is an appendix to Ancient Ecocosmology - 2

The extremely large DNA file had to be separated into smaller (1 gibabyte) sections. Each section is depicted in the following HTML tables.

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
29,167,463
Codon	Codon count
GCT	588,540
GCC	532,854
GCA	573,264
GCG	85,938
GCU	0
TGT	659,789
TGC	7,165
UGU	0
UGC	0
GAT	333,458
GAC	189,719
GAU	0
GAA	715,823
GAG	201,963
TTT	372,479
TTC	325,808
UUU	0
UUC	0
GGT	300,527
GGC	7,931
GGA	73,962
GGG	100,311
GGU	0
CAT	176,573
CAC	293,181
CAU	0
ATT	63,187
ATC	116,035
ATA	82,401
AUU	0
AUC	0
AUA	0
AAA	374,662
AAG	68,579
CTT	115,601
CTC	269,932
CTA	87,113
CTG	76,129
TTA	42,761
TTG	27,748
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	6,841
AUG	0
AAT	15,747
AAC	67,742
AAU	0
CCT	89,301
CCC	108,678
CCA	105,661
CCG	18,477
CCU	0
CAA	50,937
CAG	125,485
CGT	25,737
CGC	978
CGA	3,466
CGG	7,617
AGA	70,337
AGG	18,693
CGU	0
TCT	47,289
TCC	33,335
TCA	37,265
TCG	5,855
AGT	47,327
AGC	1,284
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	35,678
ACC	22,914
ACA	36,263
ACG	4,935
ACU	0
GTT	16,247
GTC	14,341
GTA	17,054
GTG	22,833
GUU	0
GUC	0
GUA	0
GUG	0
TGG	76,895
UGG	0
TAT	4,284
TAC	15,374
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,112,554
(17.53%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
29,780,232
Codon	Codon count
GCT	624,104
GCC	645,380
GCA	593,381
GCG	140,490
GCU	0
TGT	625,904
TGC	10,273
UGU	0
UGC	0
GAT	310,870
GAC	216,587
GAU	0
GAA	711,152
GAG	230,539
TTT	315,296
TTC	298,396
UUU	0
UUC	0
GGT	328,382
GGC	14,590
GGA	78,864
GGG	127,857
GGU	0
CAT	159,330
CAC	312,179
CAU	0
ATT	50,656
ATC	104,815
ATA	65,990
AUU	0
AUC	0
AUA	0
AAA	327,013
AAG	64,311
CTT	105,177
CTC	293,657
CTA	76,434
CTG	85,046
TTA	36,117
TTG	26,793
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	5,604
AUG	0
AAT	12,674
AAC	61,907
AAU	0
CCT	96,013
CCC	135,789
CCA	110,115
CCG	29,264
CCU	0
CAA	44,296
CAG	130,135
CGT	35,246
CGC	1,827
CGA	4,923
CGG	12,876
AGA	62,399
AGG	21,074
CGU	0
TCT	46,080
TCC	34,586
TCA	36,823
TCG	8,545
AGT	45,071
AGC	1,640
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	33,968
ACC	23,291
ACA	33,746
ACG	6,411
ACU	0
GTT	15,297
GTC	15,701
GTA	16,616
GTG	27,559
GUU	0
GUC	0
GUA	0
GUG	0
TGG	80,263
UGG	0
TAT	3,268
TAC	12,978
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,223,528
(17.54%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
29,706,255
Codon	Codon count
GCT	634,235
GCC	655,761
GCA	595,379
GCG	131,815
GCU	0
TGT	615,754
TGC	10,539
UGU	0
UGC	0
GAT	307,357
GAC	216,850
GAU	0
GAA	711,835
GAG	232,781
TTT	307,150
TTC	297,555
UUU	0
UUC	0
GGT	328,796
GGC	13,555
GGA	81,140
GGG	127,576
GGU	0
CAT	156,124
CAC	311,098
CAU	0
ATT	46,244
ATC	100,256
ATA	61,713
AUU	0
AUC	0
AUA	0
AAA	317,988
AAG	64,098
CTT	105,514
CTC	296,493
CTA	76,039
CTG	87,914
TTA	36,071
TTG	26,543
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	5,204
AUG	0
AAT	11,977
AAC	61,307
AAU	0
CCT	98,002
CCC	135,715
CCA	111,852
CCG	28,976
CCU	0
CAA	44,530
CAG	131,513
CGT	34,727
CGC	1,666
CGA	5,053
CGG	12,209
AGA	62,271
AGG	22,167
CGU	0
TCT	46,149
TCC	35,505
TCA	36,056
TCG	8,200
AGT	45,044
AGC	1,751
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	33,175
ACC	23,943
ACA	33,288
ACG	6,601
ACU	0
GTT	15,120
GTC	15,480
GTA	16,369
GTG	27,449
GUU	0
GUC	0
GUA	0
GUG	0
TGG	82,525
UGG	0
TAT	3,036
TAC	12,990
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,214,186
(17.55%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
30,196,172
Codon	Codon count
GCT	655,969
GCC	697,129
GCA	605,469
GCG	144,811
GCU	0
TGT	603,659
TGC	11,255
UGU	0
UGC	0
GAT	314,328
GAC	220,671
GAU	0
GAA	717,709
GAG	243,938
TTT	289,470
TTC	297,740
UUU	0
UUC	0
GGT	345,410
GGC	15,063
GGA	84,194
GGG	134,608
GGU	0
CAT	150,287
CAC	319,392
CAU	0
ATT	42,410
ATC	98,179
ATA	55,902
AUU	0
AUC	0
AUA	0
AAA	305,613
AAG	63,923
CTT	106,635
CTC	310,269
CTA	77,448
CTG	92,839
TTA	33,742
TTG	27,080
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	4,882
AUG	0
AAT	10,552
AAC	61,788
AAU	0
CCT	101,620
CCC	144,429
CCA	115,720
CCG	31,494
CCU	0
CAA	42,610
CAG	135,464
CGT	36,516
CGC	1,844
CGA	5,330
CGG	12,930
AGA	60,248
AGG	23,213
CGU	0
TCT	45,671
TCC	35,530
TCA	36,637
TCG	9,049
AGT	45,292
AGC	1,838
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	33,093
ACC	24,411
ACA	31,671
ACG	6,394
ACU	0
GTT	15,671
GTC	15,398
GTA	15,938
GTG	30,407
GUU	0
GUC	0
GUA	0
GUG	0
TGG	81,773
UGG	0
TAT	2,630
TAC	12,525
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,303,042
(17.56%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
29,082,275
Codon	Codon count
GCT	577,660
GCC	523,949
GCA	575,250
GCG	97,301
GCU	0
TGT	666,924
TGC	7,399
UGU	0
UGC	0
GAT	324,997
GAC	192,238
GAU	0
GAA	715,412
GAG	200,230
TTT	377,639
TTC	326,894
UUU	0
UUC	0
GGT	296,191
GGC	9,011
GGA	73,068
GGG	98,161
GGU	0
CAT	174,346
CAC	297,506
CAU	0
ATT	62,879
ATC	116,841
ATA	81,032
AUU	0
AUC	0
AUA	0
AAA	377,529
AAG	66,671
CTT	112,979
CTC	266,687
CTA	84,658
CTG	72,614
TTA	42,006
TTG	26,897
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	6,698
AUG	0
AAT	15,618
AAC	67,895
AAU	0
CCT	85,392
CCC	107,906
CCA	103,700
CCG	21,421
CCU	0
CAA	48,559
CAG	120,643
CGT	29,305
CGC	1,095
CGA	3,938
CGG	8,548
AGA	68,591
AGG	18,420
CGU	0
TCT	47,467
TCC	33,126
TCA	37,427
TCG	6,575
AGT	46,624
AGC	1,132
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	35,734
ACC	22,897
ACA	36,566
ACG	5,924
ACU	0
GTT	16,272
GTC	15,423
GTA	16,937
GTG	23,756
GUU	0
GUC	0
GUA	0
GUG	0
TGG	75,027
UGG	0
TAT	4,303
TAC	14,962
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,103,725
(17.55%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
29,968,823
Codon	Codon count
GCT	618,806
GCC	590,358
GCA	596,130
GCG	106,147
GCU	0
TGT	658,092
TGC	8,275
UGU	0
UGC	0
GAT	330,643
GAC	203,434
GAU	0
GAA	736,748
GAG	220,253
TTT	350,388
TTC	321,520
UUU	0
UUC	0
GGT	316,678
GGC	9,504
GGA	79,805
GGG	110,392
GGU	0
CAT	168,548
CAC	307,182
CAU	0
ATT	56,483
ATC	112,007
ATA	74,004
AUU	0
AUC	0
AUA	0
AAA	357,452
AAG	67,982
CTT	112,998
CTC	288,730
CTA	85,023
CTG	82,415
TTA	41,422
TTG	27,997
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	6,254
AUG	0
AAT	13,723
AAC	65,894
AAU	0
CCT	94,026
CCC	119,767
CCA	109,054
CCG	23,516
CCU	0
CAA	49,119
CAG	131,859
CGT	30,416
CGC	1,266
CGA	4,479
CGG	9,658
AGA	67,959
AGG	20,356
CGU	0
TCT	47,896
TCC	35,585
TCA	38,835
TCG	7,111
AGT	47,734
AGC	1,421
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	35,026
ACC	23,699
ACA	35,807
ACG	5,701
ACU	0
GTT	16,022
GTC	15,443
GTA	17,544
GTG	25,782
GUU	0
GUC	0
GUA	0
GUG	0
TGG	80,340
UGG	0
TAT	3,928
TAC	14,331
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,251,922
(17.52%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
31,235,624
Codon	Codon count
GCT	690,019
GCC	744,805
GCA	642,755
GCG	148,268
GCU	0
TGT	620,301
TGC	11,186
UGU	0
UGC	0
GAT	306,750
GAC	240,702
GAU	0
GAA	741,918
GAG	254,793
TTT	282,326
TTC	296,132
UUU	0
UUC	0
GGT	361,530
GGC	14,629
GGA	88,893
GGG	147,221
GGU	0
CAT	155,221
CAC	337,413
CAU	0
ATT	41,254
ATC	94,843
ATA	54,574
AUU	0
AUC	0
AUA	0
AAA	295,969
AAG	64,124
CTT	104,469
CTC	314,424
CTA	74,219
CTG	100,190
TTA	33,885
TTG	26,741
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	4,793
AUG	0
AAT	10,631
AAC	61,189
AAU	0
CCT	111,534
CCC	152,485
CCA	120,559
CCG	33,591
CCU	0
CAA	42,621
CAG	142,147
CGT	39,691
CGC	1,659
CGA	5,481
CGG	14,564
AGA	61,302
AGG	25,877
CGU	0
TCT	49,222
TCC	38,838
TCA	36,941
TCG	9,259
AGT	47,984
AGC	2,235
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	32,957
ACC	23,927
ACA	33,423
ACG	7,086
ACU	0
GTT	14,677
GTC	16,865
GTA	16,006
GTG	31,997
GUU	0
GUC	0
GUA	0
GUG	0
TGG	88,425
UGG	0
TAT	2,480
TAC	11,598
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,490,830
(17.58%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
29,921,243
Codon	Codon count
GCT	627,133
GCC	665,445
GCA	589,140
GCG	140,525
GCU	0
TGT	614,944
TGC	10,628
UGU	0
UGC	0
GAT	311,338
GAC	220,774
GAU	0
GAA	715,951
GAG	241,883
TTT	292,200
TTC	293,157
UUU	0
UUC	0
GGT	342,389
GGC	14,126
GGA	82,016
GGG	131,390
GGU	0
CAT	157,225
CAC	323,581
CAU	0
ATT	44,209
ATC	101,592
ATA	59,553
AUU	0
AUC	0
AUA	0
AAA	313,752
AAG	64,213
CTT	103,980
CTC	312,429
CTA	77,258
CTG	89,931
TTA	33,333
TTG	26,008
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	5,257
AUG	0
AAT	11,868
AAC	62,118
AAU	0
CCT	100,216
CCC	143,887
CCA	113,114
CCG	27,908
CCU	0
CAA	44,309
CAG	135,011
CGT	34,754
CGC	2,282
CGA	4,988
CGG	12,474
AGA	60,942
AGG	23,065
CGU	0
TCT	45,368
TCC	35,408
TCA	37,258
TCG	8,316
AGT	44,794
AGC	1,796
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	33,963
ACC	23,677
ACA	32,916
ACG	6,196
ACU	0
GTT	15,641
GTC	15,473
GTA	15,976
GTG	29,321
GUU	0
GUC	0
GUA	0
GUG	0
TGG	82,389
UGG	0
TAT	2,909
TAC	12,394
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,242,970
(17.52%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
30,201,462
Codon	Codon count
GCT	628,248
GCC	619,616
GCA	597,094
GCG	115,164
GCU	0
TGT	641,151
TGC	9,083
UGU	0
UGC	0
GAT	328,975
GAC	210,168
GAU	0
GAA	735,315
GAG	228,881
TTT	339,271
TTC	318,805
UUU	0
UUC	0
GGT	328,853
GGC	11,526
GGA	80,091
GGG	118,237
GGU	0
CAT	166,014
CAC	310,863
CAU	0
ATT	53,236
ATC	108,150
ATA	69,382
AUU	0
AUC	0
AUA	0
AAA	348,016
AAG	67,123
CTT	114,781
CTC	300,619
CTA	84,056
CTG	84,919
TTA	39,399
TTG	27,952
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	5,900
AUG	0
AAT	13,099
AAC	65,440
AAU	0
CCT	97,321
CCC	128,254
CCA	113,198
CCG	24,846
CCU	0
CAA	47,948
CAG	131,774
CGT	30,557
CGC	1,533
CGA	4,419
CGG	10,353
AGA	65,639
AGG	21,401
CGU	0
TCT	48,782
TCC	36,995
TCA	38,889
TCG	7,403
AGT	47,675
AGC	1,495
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	35,422
ACC	24,692
ACA	35,219
ACG	5,721
ACU	0
GTT	15,857
GTC	14,497
GTA	17,103
GTG	25,033
GUU	0
GUC	0
GUA	0
GUG	0
TGG	81,613
UGG	0
TAT	3,653
TAC	13,437
UAU	0
UAC	0
TAA	0
TAG	0
TGA	1
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,300,991
(17.55%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
30,118,424
Codon	Codon count
GCT	640,932
GCC	657,448
GCA	604,225
GCG	128,527
GCU	0
TGT	622,731
TGC	10,104
UGU	0
UGC	0
GAT	320,819
GAC	217,089
GAU	0
GAA	724,526
GAG	231,090
TTT	314,526
TTC	303,785
UUU	0
UUC	0
GGT	334,752
GGC	13,157
GGA	80,818
GGG	124,236
GGU	0
CAT	162,390
CAC	312,306
CAU	0
ATT	49,054
ATC	104,303
ATA	64,471
AUU	0
AUC	0
AUA	0
AAA	331,392
AAG	66,214
CTT	109,021
CTC	296,987
CTA	77,770
CTG	90,141
TTA	37,257
TTG	27,737
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	5,675
AUG	0
AAT	12,364
AAC	63,415
AAU	0
CCT	96,906
CCC	135,490
CCA	114,073
CCG	27,736
CCU	0
CAA	46,641
CAG	133,317
CGT	33,799
CGC	1,894
CGA	4,732
CGG	11,182
AGA	63,676
AGG	21,710
CGU	0
TCT	46,613
TCC	35,529
TCA	37,167
TCG	7,899
AGT	45,028
AGC	1,559
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	33,578
ACC	23,914
ACA	33,401
ACG	6,028
ACU	0
GTT	16,396
GTC	15,393
GTA	15,867
GTG	28,186
GUU	0
GUC	0
GUA	0
GUG	0
TGG	82,727
UGG	0
TAT	3,066
TAC	13,363
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,290,028
(17.56%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
29,499,891
Codon	Codon count
GCT	612,920
GCC	596,201
GCA	589,453
GCG	118,224
GCU	0
TGT	638,312
TGC	8,807
UGU	0
UGC	0
GAT	314,576
GAC	207,242
GAU	0
GAA	717,687
GAG	219,906
TTT	341,616
TTC	313,257
UUU	0
UUC	0
GGT	315,744
GGC	11,676
GGA	77,759
GGG	112,768
GGU	0
CAT	162,277
CAC	307,762
CAU	0
ATT	54,204
ATC	107,617
ATA	69,878
AUU	0
AUC	0
AUA	0
AAA	343,488
AAG	64,242
CTT	109,647
CTC	279,650
CTA	79,759
CTG	81,080
TTA	38,748
TTG	26,433
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	6,212
AUG	0
AAT	13,052
AAC	63,942
AAU	0
CCT	92,656
CCC	121,986
CCA	107,595
CCG	25,426
CCU	0
CAA	46,465
CAG	129,545
CGT	33,296
CGC	1,552
CGA	4,443
CGG	10,984
AGA	63,842
AGG	20,696
CGU	0
TCT	47,390
TCC	35,584
TCA	37,225
TCG	7,521
AGT	47,053
AGC	1,383
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	34,184
ACC	23,214
ACA	35,493
ACG	6,199
ACU	0
GTT	15,710
GTC	16,059
GTA	16,786
GTG	25,481
GUU	0
GUC	0
GUA	0
GUG	0
TGG	78,970
UGG	0
TAT	3,558
TAC	13,752
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,175,330
(17.54%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
28,942,484
Codon	Codon count
GCT	573,832
GCC	518,432
GCA	566,736
GCG	93,569
GCU	0
TGT	668,891
TGC	8,133
UGU	0
UGC	0
GAT	326,381
GAC	189,872
GAU	0
GAA	711,876
GAG	196,601
TTT	376,672
TTC	324,658
UUU	0
UUC	0
GGT	294,156
GGC	8,429
GGA	73,366
GGG	98,648
GGU	0
CAT	175,613
CAC	292,663
CAU	0
ATT	63,756
ATC	116,812
ATA	84,726
AUU	0
AUC	0
AUA	0
AAA	379,314
AAG	66,327
CTT	112,515
CTC	263,671
CTA	83,942
CTG	72,696
TTA	43,643
TTG	27,070
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	7,076
AUG	0
AAT	15,759
AAC	67,644
AAU	0
CCT	84,863
CCC	107,428
CCA	101,412
CCG	20,438
CCU	0
CAA	49,746
CAG	122,112
CGT	28,057
CGC	1,025
CGA	3,863
CGG	8,463
AGA	69,615
AGG	17,334
CGU	0
TCT	47,310
TCC	32,728
TCA	37,482
TCG	6,524
AGT	46,951
AGC	1,238
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	36,291
ACC	22,504
ACA	37,860
ACG	5,406
ACU	0
GTT	15,815
GTC	14,682
GTA	16,854
GTG	23,068
GUU	0
GUC	0
GUA	0
GUG	0
TGG	75,331
UGG	0
TAT	4,651
TAC	15,481
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,068,451
(17.51%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
28,940,042
Codon	Codon count
GCT	580,591
GCC	550,447
GCA	569,252
GCG	99,381
GCU	0
TGT	642,786
TGC	8,734
UGU	0
UGC	0
GAT	325,081
GAC	189,009
GAU	0
GAA	704,786
GAG	206,437
TTT	361,298
TTC	311,794
UUU	0
UUC	0
GGT	304,231
GGC	9,903
GGA	72,879
GGG	101,198
GGU	0
CAT	168,937
CAC	297,148
CAU	0
ATT	58,930
ATC	114,058
ATA	77,625
AUU	0
AUC	0
AUA	0
AAA	371,323
AAG	67,349
CTT	112,169
CTC	278,379
CTA	83,389
CTG	75,907
TTA	39,782
TTG	26,728
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	6,698
AUG	0
AAT	14,670
AAC	65,627
AAU	0
CCT	86,148
CCC	113,497
CCA	103,836
CCG	20,100
CCU	0
CAA	48,620
CAG	125,318
CGT	26,409
CGC	1,315
CGA	3,977
CGG	8,347
AGA	65,852
AGG	18,648
CGU	0
TCT	45,482
TCC	32,154
TCA	37,518
TCG	6,536
AGT	44,793
AGC	1,222
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	36,138
ACC	23,308
ACA	35,660
ACG	5,102
ACU	0
GTT	15,866
GTC	14,151
GTA	16,652
GTG	24,152
GUU	0
GUC	0
GUA	0
GUG	0
TGG	77,810
UGG	0
TAT	4,125
TAC	15,341
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,076,233
(17.54%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
29,459,764
Codon	Codon count
GCT	631,113
GCC	668,677
GCA	591,367
GCG	139,447
GCU	0
TGT	594,713
TGC	10,603
UGU	0
UGC	0
GAT	309,244
GAC	210,354
GAU	0
GAA	693,221
GAG	236,141
TTT	300,577
TTC	292,166
UUU	0
UUC	0
GGT	329,442
GGC	14,868
GGA	81,616
GGG	128,418
GGU	0
CAT	149,656
CAC	306,332
CAU	0
ATT	45,148
ATC	98,647
ATA	59,065
AUU	0
AUC	0
AUA	0
AAA	315,176
AAG	63,359
CTT	105,257
CTC	302,364
CTA	77,093
CTG	86,917
TTA	34,858
TTG	26,478
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	5,239
AUG	0
AAT	11,164
AAC	61,152
AAU	0
CCT	96,915
CCC	138,792
CCA	110,857
CCG	28,634
CCU	0
CAA	43,171
CAG	130,171
CGT	34,132
CGC	2,042
CGA	5,221
CGG	12,068
AGA	60,476
AGG	21,384
CGU	0
TCT	44,259
TCC	34,840
TCA	36,431
TCG	8,351
AGT	43,003
AGC	1,677
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	33,451
ACC	24,047
ACA	31,627
ACG	5,976
ACU	0
GTT	15,066
GTC	15,103
GTA	15,918
GTG	27,556
GUU	0
GUC	0
GUA	0
GUG	0
TGG	80,319
UGG	0
TAT	3,009
TAC	12,685
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,168,605
(17.54%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
28,161,830
Codon	Codon count
GCT	547,448
GCC	465,197
GCA	540,440
GCG	72,687
GCU	0
TGT	668,782
TGC	6,177
UGU	0
UGC	0
GAT	335,143
GAC	170,552
GAU	0
GAA	686,123
GAG	179,892
TTT	399,964
TTC	325,653
UUU	0
UUC	0
GGT	282,406
GGC	7,188
GGA	68,992
GGG	84,841
GGU	0
CAT	178,056
CAC	277,669
CAU	0
ATT	70,570
ATC	122,462
ATA	93,133
AUU	0
AUC	0
AUA	0
AAA	400,222
AAG	67,415
CTT	116,241
CTC	253,712
CTA	88,720
CTG	65,632
TTA	45,204
TTG	27,283
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	7,567
AUG	0
AAT	17,405
AAC	68,198
AAU	0
CCT	78,232
CCC	96,596
CCA	97,813
CCG	15,611
CCU	0
CAA	52,328
CAG	116,399
CGT	23,228
CGC	725
CGA	3,342
CGG	6,198
AGA	71,248
AGG	15,979
CGU	0
TCT	44,628
TCC	31,512
TCA	37,334
TCG	5,600
AGT	45,837
AGC	969
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	37,025
ACC	22,302
ACA	37,111
ACG	4,461
ACU	0
GTT	15,854
GTC	14,111
GTA	16,885
GTG	20,686
GUU	0
GUC	0
GUA	0
GUG	0
TGG	71,605
UGG	0
TAT	4,938
TAC	16,247
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 4,924,496
(17.49%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
28,916,524
Codon	Codon count
GCT	556,481
GCC	505,432
GCA	547,841
GCG	76,701
GCU	0
TGT	665,663
TGC	6,640
UGU	0
UGC	0
GAT	346,486
GAC	182,057
GAU	0
GAA	705,242
GAG	191,037
TTT	396,463
TTC	324,936
UUU	0
UUC	0
GGT	298,982
GGC	6,811
GGA	70,135
GGG	97,923
GGU	0
CAT	181,302
CAC	291,249
CAU	0
ATT	68,697
ATC	121,776
ATA	92,008
AUU	0
AUC	0
AUA	0
AAA	393,526
AAG	69,964
CTT	115,787
CTC	263,239
CTA	91,116
CTG	73,293
TTA	43,008
TTG	28,570
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	7,527
AUG	0
AAT	16,626
AAC	70,398
AAU	0
CCT	80,416
CCC	108,243
CCA	103,886
CCG	16,544
CCU	0
CAA	52,212
CAG	118,372
CGT	23,753
CGC	947
CGA	3,668
CGG	7,098
AGA	70,401
AGG	17,505
CGU	0
TCT	45,946
TCC	32,910
TCA	36,297
TCG	5,882
AGT	45,852
AGC	739
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	37,536
ACC	23,246
ACA	36,867
ACG	4,691
ACU	0
GTT	15,447
GTC	13,735
GTA	18,074
GTG	22,010
GUU	0
GUC	0
GUA	0
GUG	0
TGG	76,809
UGG	0
TAT	4,872
TAC	16,456
UAU	0
UAC	0
TAA	0
TAG	0
TGA	1
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,074,531
(17.55%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
28,747,901
Codon	Codon count
GCT	571,179
GCC	512,065
GCA	555,163
GCG	77,114
GCU	0
TGT	660,912
TGC	6,976
UGU	0
UGC	0
GAT	331,100
GAC	184,512
GAU	0
GAA	705,834
GAG	195,280
TTT	381,636
TTC	322,240
UUU	0
UUC	0
GGT	294,931
GGC	7,082
GGA	71,150
GGG	95,549
GGU	0
CAT	175,383
CAC	288,054
CAU	0
ATT	65,442
ATC	119,584
ATA	85,462
AUU	0
AUC	0
AUA	0
AAA	382,153
AAG	67,532
CTT	116,304
CTC	264,641
CTA	88,171
CTG	74,036
TTA	42,681
TTG	28,099
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	7,148
AUG	0
AAT	15,811
AAC	68,750
AAU	0
CCT	85,753
CCC	104,825
CCA	103,103
CCG	17,352
CCU	0
CAA	50,706
CAG	121,288
CGT	23,700
CGC	859
CGA	3,452
CGG	6,797
AGA	69,942
AGG	17,864
CGU	0
TCT	46,754
TCC	32,492
TCA	37,871
TCG	5,658
AGT	47,057
AGC	1,145
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	36,627
ACC	22,285
ACA	36,855
ACG	4,747
ACU	0
GTT	16,044
GTC	14,118
GTA	17,301
GTG	22,202
GUU	0
GUC	0
GUA	0
GUG	0
TGG	75,387
UGG	0
TAT	4,478
TAC	15,881
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,034,350
(17.51%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
28,710,450
Codon	Codon count
GCT	594,093
GCC	585,363
GCA	569,574
GCG	100,202
GCU	0
TGT	607,854
TGC	8,749
UGU	0
UGC	0
GAT	318,439
GAC	199,929
GAU	0
GAA	695,228
GAG	218,621
TTT	323,324
TTC	306,932
UUU	0
UUC	0
GGT	307,628
GGC	9,694
GGA	77,905
GGG	114,427
GGU	0
CAT	162,434
CAC	294,287
CAU	0
ATT	52,023
ATC	106,217
ATA	69,389
AUU	0
AUC	0
AUA	0
AAA	334,783
AAG	63,802
CTT	107,873
CTC	280,480
CTA	83,122
CTG	81,508
TTA	36,208
TTG	26,426
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	5,633
AUG	0
AAT	12,919
AAC	64,576
AAU	0
CCT	91,340
CCC	122,705
CCA	107,715
CCG	21,673
CCU	0
CAA	44,564
CAG	126,371
CGT	27,322
CGC	1,284
CGA	4,052
CGG	9,079
AGA	64,945
AGG	21,242
CGU	0
TCT	44,830
TCC	33,063
TCA	36,661
TCG	6,608
AGT	45,912
AGC	1,335
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	33,447
ACC	22,538
ACA	33,254
ACG	5,112
ACU	0
GTT	15,210
GTC	14,139
GTA	15,949
GTG	24,522
GUU	0
GUC	0
GUA	0
GUG	0
TGG	78,777
UGG	0
TAT	3,511
TAC	13,710
UAU	0
UAC	0
TAA	0
TAG	0
TGA	1
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,038,911
(17.55%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
29,926,954
Codon	Codon count
GCT	616,805
GCC	601,243
GCA	592,105
GCG	114,481
GCU	0
TGT	653,368
TGC	8,564
UGU	0
UGC	0
GAT	327,339
GAC	203,733
GAU	0
GAA	724,596
GAG	218,422
TTT	345,693
TTC	317,954
UUU	0
UUC	0
GGT	320,292
GGC	11,022
GGA	78,078
GGG	112,381
GGU	0
CAT	168,176
CAC	311,824
CAU	0
ATT	56,259
ATC	111,753
ATA	72,827
AUU	0
AUC	0
AUA	0
AAA	358,194
AAG	66,359
CTT	113,043
CTC	290,718
CTA	81,719
CTG	82,515
TTA	40,371
TTG	27,428
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	6,199
AUG	0
AAT	14,204
AAC	65,810
AAU	0
CCT	91,039
CCC	123,501
CCA	108,238
CCG	24,493
CCU	0
CAA	47,964
CAG	130,622
CGT	31,739
CGC	1,546
CGA	4,647
CGG	10,218
AGA	67,403
AGG	20,654
CGU	0
TCT	47,794
TCC	34,256
TCA	38,626
TCG	7,110
AGT	46,804
AGC	1,587
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	36,376
ACC	24,457
ACA	35,566
ACG	5,702
ACU	0
GTT	17,001
GTC	15,206
GTA	16,822
GTG	25,439
GUU	0
GUC	0
GUA	0
GUG	0
TGG	80,004
UGG	0
TAT	3,924
TAC	14,282
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,247,469
(17.53%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
29,610,726
Codon	Codon count
GCT	603,627
GCC	574,168
GCA	589,853
GCG	96,243
GCU	0
TGT	655,797
TGC	8,134
UGU	0
UGC	0
GAT	330,028
GAC	200,087
GAU	0
GAA	723,097
GAG	211,011
TTT	355,914
TTC	321,831
UUU	0
UUC	0
GGT	311,519
GGC	9,660
GGA	76,272
GGG	107,424
GGU	0
CAT	172,139
CAC	303,550
CAU	0
ATT	58,641
ATC	112,114
ATA	76,948
AUU	0
AUC	0
AUA	0
AAA	359,840
AAG	68,139
CTT	114,356
CTC	279,145
CTA	85,983
CTG	80,306
TTA	40,848
TTG	27,659
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	6,242
AUG	0
AAT	14,430
AAC	66,807
AAU	0
CCT	90,839
CCC	115,730
CCA	108,545
CCG	21,521
CCU	0
CAA	49,343
CAG	128,577
CGT	28,670
CGC	1,296
CGA	4,198
CGG	8,529
AGA	67,483
AGG	20,385
CGU	0
TCT	48,375
TCC	34,910
TCA	37,854
TCG	6,563
AGT	48,309
AGC	1,229
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	35,429
ACC	23,164
ACA	36,721
ACG	5,396
ACU	0
GTT	15,709
GTC	14,599
GTA	17,093
GTG	23,756
GUU	0
GUC	0
GUA	0
GUG	0
TGG	80,090
UGG	0
TAT	4,017
TAC	14,955
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,205,435
(17.58%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
29,293,222
Codon	Codon count
GCT	596,431
GCC	562,853
GCA	576,063
GCG	101,324
GCU	0
TGT	648,050
TGC	7,723
UGU	0
UGC	0
GAT	326,483
GAC	198,805
GAU	0
GAA	713,641
GAG	206,822
TTT	361,910
TTC	317,574
UUU	0
UUC	0
GGT	309,974
GGC	9,752
GGA	75,223
GGG	108,341
GGU	0
CAT	169,097
CAC	296,249
CAU	0
ATT	59,459
ATC	111,560
ATA	77,619
AUU	0
AUC	0
AUA	0
AAA	363,014
AAG	66,941
CTT	113,352
CTC	277,645
CTA	83,750
CTG	78,618
TTA	40,585
TTG	28,359
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	6,196
AUG	0
AAT	14,517
AAC	65,554
AAU	0
CCT	87,660
CCC	116,564
CCA	106,266
CCG	22,081
CCU	0
CAA	48,553
CAG	126,584
CGT	29,245
CGC	1,425
CGA	3,990
CGG	9,415
AGA	67,649
AGG	19,342
CGU	0
TCT	46,933
TCC	33,497
TCA	38,087
TCG	6,574
AGT	46,087
AGC	1,296
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	34,823
ACC	23,719
ACA	35,770
ACG	5,647
ACU	0
GTT	15,649
GTC	14,585
GTA	16,227
GTG	23,728
GUU	0
GUC	0
GUA	0
GUG	0
TGG	78,572
UGG	0
TAT	4,110
TAC	14,977
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,135,605
(17.53%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
28,837,196
Codon	Codon count
GCT	583,549
GCC	550,590
GCA	563,973
GCG	95,805
GCU	0
TGT	646,618
TGC	7,470
UGU	0
UGC	0
GAT	322,246
GAC	191,269
GAU	0
GAA	703,593
GAG	203,164
TTT	354,071
TTC	311,330
UUU	0
UUC	0
GGT	305,895
GGC	9,689
GGA	74,379
GGG	104,056
GGU	0
CAT	167,577
CAC	296,932
CAU	0
ATT	58,503
ATC	111,540
ATA	77,022
AUU	0
AUC	0
AUA	0
AAA	360,791
AAG	67,592
CTT	112,292
CTC	271,794
CTA	84,224
CTG	76,402
TTA	40,604
TTG	27,284
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	6,348
AUG	0
AAT	14,181
AAC	64,711
AAU	0
CCT	87,627
CCC	112,802
CCA	105,017
CCG	19,826
CCU	0
CAA	47,644
CAG	124,409
CGT	27,870
CGC	1,382
CGA	4,011
CGG	8,410
AGA	67,975
AGG	18,889
CGU	0
TCT	45,559
TCC	32,718
TCA	38,038
TCG	6,469
AGT	46,509
AGC	1,333
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	34,845
ACC	23,051
ACA	35,072
ACG	5,184
ACU	0
GTT	15,177
GTC	14,186
GTA	16,833
GTG	24,067
GUU	0
GUC	0
GUA	0
GUG	0
TGG	76,941
UGG	0
TAT	3,706
TAC	15,025
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,058,989
(17.54%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
29,872,800
Codon	Codon count
GCT	633,433
GCC	633,983
GCA	590,729
GCG	113,899
GCU	0
TGT	631,294
TGC	9,202
UGU	0
UGC	0
GAT	324,808
GAC	208,829
GAU	0
GAA	716,559
GAG	226,286
TTT	326,099
TTC	309,392
UUU	0
UUC	0
GGT	325,505
GGC	11,642
GGA	79,163
GGG	118,414
GGU	0
CAT	162,796
CAC	305,056
CAU	0
ATT	51,481
ATC	107,124
ATA	68,105
AUU	0
AUC	0
AUA	0
AAA	339,392
AAG	67,693
CTT	112,537
CTC	297,197
CTA	82,393
CTG	86,124
TTA	37,987
TTG	26,625
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	5,783
AUG	0
AAT	12,596
AAC	63,363
AAU	0
CCT	97,468
CCC	125,953
CCA	112,654
CCG	23,762
CCU	0
CAA	47,325
CAG	134,147
CGT	29,741
CGC	1,255
CGA	4,182
CGG	10,293
AGA	64,955
AGG	21,548
CGU	0
TCT	46,831
TCC	34,480
TCA	38,410
TCG	7,353
AGT	46,023
AGC	1,552
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	35,784
ACC	23,932
ACA	34,440
ACG	5,454
ACU	0
GTT	15,736
GTC	15,390
GTA	16,504
GTG	26,745
GUU	0
GUC	0
GUA	0
GUG	0
TGG	82,425
UGG	0
TAT	3,467
TAC	14,151
UAU	0
UAC	0
TAA	0
TAG	0
TGA	1
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,250,450
(17.58%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
12,608,382
Codon	Codon count
GCT	247,725
GCC	228,434
GCA	241,220
GCG	39,179
GCU	0
TGT	285,094
TGC	2,939
UGU	0
UGC	0
GAT	150,406
GAC	81,046
GAU	0
GAA	302,627
GAG	85,087
TTT	165,348
TTC	142,616
UUU	0
UUC	0
GGT	129,100
GGC	3,859
GGA	31,903
GGG	44,303
GGU	0
CAT	77,476
CAC	126,462
CAU	0
ATT	28,660
ATC	52,590
ATA	38,355
AUU	0
AUC	0
AUA	0
AAA	164,909
AAG	31,352
CTT	50,529
CTC	115,071
CTA	39,756
CTG	31,365
TTA	18,534
TTG	12,670
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	3,270
AUG	0
AAT	6,895
AAC	29,842
AAU	0
CCT	35,937
CCC	47,925
CCA	45,134
CCG	8,103
CCU	0
CAA	22,760
CAG	52,614
CGT	11,032
CGC	470
CGA	1,583
CGG	3,350
AGA	31,103
AGG	7,957
CGU	0
TCT	19,250
TCC	14,679
TCA	16,021
TCG	2,624
AGT	20,800
AGC	514
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	15,330
ACC	9,679
ACA	16,439
ACG	2,108
ACU	0
GTT	6,602
GTC	5,889
GTA	7,200
GTG	9,946
GUU	0
GUC	0
GUA	0
GUG	0
TGG	33,526
UGG	0
TAT	1,931
TAC	6,833
UAU	0
UAC	0
TAA	0
TAG	0
TGA	1
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 2,210,496
(17.53%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
29,324,659
Codon	Codon count
GCT	601,099
GCC	565,646
GCA	574,548
GCG	104,133
GCU	0
TGT	634,121
TGC	8,312
UGU	0
UGC	0
GAT	329,459
GAC	198,628
GAU	0
GAA	718,322
GAG	216,729
TTT	351,370
TTC	320,254
UUU	0
UUC	0
GGT	307,349
GGC	9,581
GGA	76,652
GGG	107,540
GGU	0
CAT	168,170
CAC	299,828
CAU	0
ATT	55,661
ATC	113,128
ATA	73,785
AUU	0
AUC	0
AUA	0
AAA	360,266
AAG	67,506
CTT	114,050
CTC	288,344
CTA	84,446
CTG	78,836
TTA	39,923
TTG	27,628
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	6,290
AUG	0
AAT	13,979
AAC	64,371
AAU	0
CCT	90,792
CCC	117,947
CCA	106,051
CCG	21,522
CCU	0
CAA	48,971
CAG	126,130
CGT	28,453
CGC	1,237
CGA	4,131
CGG	9,179
AGA	66,812
AGG	19,539
CGU	0
TCT	45,402
TCC	34,056
TCA	37,539
TCG	6,983
AGT	46,674
AGC	1,375
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	34,831
ACC	23,554
ACA	34,179
ACG	5,321
ACU	0
GTT	16,290
GTC	14,329
GTA	16,412
GTG	24,270
GUU	0
GUC	0
GUA	0
GUG	0
TGG	78,726
UGG	0
TAT	3,908
TAC	14,817
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,146,507
(17.55%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
30,598,730
Codon	Codon count
GCT	647,316
GCC	658,259
GCA	612,225
GCG	125,230
GCU	0
TGT	639,597
TGC	9,994
UGU	0
UGC	0
GAT	323,724
GAC	220,824
GAU	0
GAA	740,522
GAG	236,978
TTT	324,320
TTC	317,161
UUU	0
UUC	0
GGT	335,881
GGC	12,533
GGA	83,269
GGG	129,664
GGU	0
CAT	164,855
CAC	320,686
CAU	0
ATT	50,196
ATC	106,936
ATA	65,756
AUU	0
AUC	0
AUA	0
AAA	332,854
AAG	68,228
CTT	109,352
CTC	298,228
CTA	80,071
CTG	89,944
TTA	36,605
TTG	27,417
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	5,504
AUG	0
AAT	12,557
AAC	65,277
AAU	0
CCT	99,844
CCC	137,116
CCA	116,692
CCG	27,032
CCU	0
CAA	46,299
CAG	133,914
CGT	33,806
CGC	1,457
CGA	5,033
CGG	11,008
AGA	65,273
AGG	23,260
CGU	0
TCT	48,490
TCC	36,522
TCA	38,393
TCG	8,108
AGT	47,506
AGC	1,575
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	34,808
ACC	23,459
ACA	34,825
ACG	6,556
ACU	0
GTT	15,205
GTC	15,714
GTA	16,425
GTG	27,900
GUU	0
GUC	0
GUA	0
GUG	0
TGG	83,199
UGG	0
TAT	3,359
TAC	13,067
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,375,306
(17.57%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
30,304,429
Codon	Codon count
GCT	645,084
GCC	651,932
GCA	612,013
GCG	119,667
GCU	0
TGT	631,328
TGC	9,132
UGU	0
UGC	0
GAT	319,688
GAC	222,711
GAU	0
GAA	730,986
GAG	232,636
TTT	327,171
TTC	310,629
UUU	0
UUC	0
GGT	330,191
GGC	12,124
GGA	84,232
GGG	129,357
GGU	0
CAT	163,373
CAC	311,321
CAU	0
ATT	51,328
ATC	102,906
ATA	67,866
AUU	0
AUC	0
AUA	0
AAA	330,942
AAG	66,165
CTT	110,069
CTC	290,851
CTA	81,595
CTG	91,367
TTA	36,619
TTG	26,804
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	5,551
AUG	0
AAT	12,576
AAC	64,390
AAU	0
CCT	100,625
CCC	133,570
CCA	116,206
CCG	28,460
CCU	0
CAA	45,158
CAG	132,576
CGT	32,615
CGC	1,541
CGA	4,352
CGG	11,105
AGA	65,538
AGG	22,382
CGU	0
TCT	49,038
TCC	36,873
TCA	36,920
TCG	7,314
AGT	47,781
AGC	1,649
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	34,188
ACC	23,889
ACA	35,019
ACG	6,402
ACU	0
GTT	14,847
GTC	15,884
GTA	16,439
GTG	27,337
GUU	0
GUC	0
GUA	0
GUG	0
TGG	82,427
UGG	0
TAT	3,336
TAC	12,934
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,317,402
(17.55%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
29,328,191
Codon	Codon count
GCT	610,916
GCC	592,378
GCA	578,243
GCG	94,935
GCU	0
TGT	630,938
TGC	7,981
UGU	0
UGC	0
GAT	328,184
GAC	197,139
GAU	0
GAA	712,460
GAG	217,402
TTT	341,522
TTC	318,078
UUU	0
UUC	0
GGT	313,358
GGC	9,664
GGA	78,140
GGG	111,853
GGU	0
CAT	166,814
CAC	298,408
CAU	0
ATT	55,723
ATC	108,649
ATA	72,602
AUU	0
AUC	0
AUA	0
AAA	349,129
AAG	66,046
CTT	112,195
CTC	283,385
CTA	83,380
CTG	82,930
TTA	38,933
TTG	27,808
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	6,068
AUG	0
AAT	13,488
AAC	63,294
AAU	0
CCT	94,002
CCC	120,348
CCA	110,094
CCG	20,616
CCU	0
CAA	48,418
CAG	130,346
CGT	25,712
CGC	1,049
CGA	4,022
CGG	8,154
AGA	65,791
AGG	20,712
CGU	0
TCT	46,113
TCC	34,329
TCA	38,893
TCG	6,849
AGT	46,581
AGC	1,070
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	34,667
ACC	23,491
ACA	34,055
ACG	4,760
ACU	0
GTT	15,460
GTC	13,958
GTA	16,317
GTG	24,055
GUU	0
GUC	0
GUA	0
GUG	0
TGG	79,461
UGG	0
TAT	3,730
TAC	14,387
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,149,742
(17.56%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
29,207,503
Codon	Codon count
GCT	593,059
GCC	561,442
GCA	571,359
GCG	92,202
GCU	0
TGT	644,863
TGC	7,444
UGU	0
UGC	0
GAT	330,422
GAC	196,755
GAU	0
GAA	712,561
GAG	212,132
TTT	354,095
TTC	321,010
UUU	0
UUC	0
GGT	309,389
GGC	9,016
GGA	76,351
GGG	106,674
GGU	0
CAT	168,996
CAC	293,251
CAU	0
ATT	57,707
ATC	111,172
ATA	76,170
AUU	0
AUC	0
AUA	0
AAA	360,381
AAG	66,514
CTT	113,932
CTC	284,099
CTA	85,444
CTG	80,249
TTA	41,127
TTG	26,477
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	6,593
AUG	0
AAT	14,364
AAC	65,710
AAU	0
CCT	90,991
CCC	114,124
CCA	106,564
CCG	20,293
CCU	0
CAA	48,377
CAG	127,927
CGT	27,648
CGC	1,197
CGA	3,996
CGG	8,631
AGA	68,049
AGG	19,885
CGU	0
TCT	47,183
TCC	34,349
TCA	37,064
TCG	6,393
AGT	46,250
AGC	1,100
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	35,233
ACC	23,171
ACA	35,259
ACG	4,869
ACU	0
GTT	15,950
GTC	14,290
GTA	17,138
GTG	23,375
GUU	0
GUC	0
GUA	0
GUG	0
TGG	77,829
UGG	0
TAT	3,903
TAC	14,961
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,126,626
(17.55%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
28,909,117
Codon	Codon count
GCT	602,065
GCC	580,854
GCA	569,936
GCG	102,971
GCU	0
TGT	627,716
TGC	8,571
UGU	0
UGC	0
GAT	317,692
GAC	196,100
GAU	0
GAA	699,690
GAG	210,394
TTT	338,771
TTC	305,782
UUU	0
UUC	0
GGT	307,693
GGC	10,654
GGA	76,255
GGG	109,076
GGU	0
CAT	162,320
CAC	293,274
CAU	0
ATT	55,108
ATC	107,874
ATA	72,558
AUU	0
AUC	0
AUA	0
AAA	348,230
AAG	65,813
CTT	111,867
CTC	279,187
CTA	81,098
CTG	81,471
TTA	38,702
TTG	26,993
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	6,300
AUG	0
AAT	13,372
AAC	64,233
AAU	0
CCT	88,776
CCC	119,268
CCA	106,582
CCG	21,750
CCU	0
CAA	47,384
CAG	126,271
CGT	28,922
CGC	1,372
CGA	4,230
CGG	8,982
AGA	65,104
AGG	19,534
CGU	0
TCT	45,557
TCC	33,982
TCA	36,186
TCG	7,020
AGT	46,044
AGC	1,279
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	35,309
ACC	23,075
ACA	34,403
ACG	5,278
ACU	0
GTT	15,467
GTC	14,452
GTA	15,886
GTG	24,221
GUU	0
GUC	0
GUA	0
GUG	0
TGG	77,853
UGG	0
TAT	3,766
TAC	14,053
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,075,239
(17.56%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
29,689,184
Codon	Codon count
GCT	657,587
GCC	712,053
GCA	600,032
GCG	131,937
GCU	0
TGT	572,378
TGC	10,669
UGU	0
UGC	0
GAT	304,402
GAC	223,362
GAU	0
GAA	703,169
GAG	253,193
TTT	262,513
TTC	282,895
UUU	0
UUC	0
GGT	344,077
GGC	14,376
GGA	86,358
GGG	142,141
GGU	0
CAT	146,696
CAC	315,313
CAU	0
ATT	38,631
ATC	91,660
ATA	51,797
AUU	0
AUC	0
AUA	0
AAA	285,822
AAG	63,801
CTT	103,764
CTC	309,674
CTA	74,810
CTG	96,462
TTA	31,377
TTG	26,339
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	4,559
AUG	0
AAT	9,452
AAC	56,786
AAU	0
CCT	106,319
CCC	148,361
CCA	114,496
CCG	28,953
CCU	0
CAA	40,694
CAG	137,607
CGT	32,517
CGC	2,010
CGA	4,957
CGG	12,164
AGA	58,862
AGG	24,156
CGU	0
TCT	45,196
TCC	35,828
TCA	36,187
TCG	8,325
AGT	45,235
AGC	1,948
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	32,612
ACC	23,221
ACA	30,259
ACG	5,371
ACU	0
GTT	14,083
GTC	14,370
GTA	15,616
GTG	29,148
GUU	0
GUC	0
GUA	0
GUG	0
TGG	82,954
UGG	0
TAT	2,507
TAC	11,672
UAU	0
UAC	0
TAA	0
TAG	0
TGA	1
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,228,042
(17.61%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
29,237,094
Codon	Codon count
GCT	597,133
GCC	573,730
GCA	579,469
GCG	105,066
GCU	0
TGT	643,735
TGC	8,351
UGU	0
UGC	0
GAT	319,506
GAC	199,142
GAU	0
GAA	711,030
GAG	212,289
TTT	350,484
TTC	317,886
UUU	0
UUC	0
GGT	306,763
GGC	10,529
GGA	76,222
GGG	109,561
GGU	0
CAT	168,051
CAC	300,573
CAU	0
ATT	57,583
ATC	109,793
ATA	74,394
AUU	0
AUC	0
AUA	0
AAA	355,518
AAG	65,985
CTT	111,340
CTC	278,408
CTA	81,656
CTG	78,290
TTA	39,737
TTG	26,257
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	6,100
AUG	0
AAT	13,745
AAC	65,197
AAU	0
CCT	91,478
CCC	116,735
CCA	106,108
CCG	23,092
CCU	0
CAA	47,625
CAG	125,439
CGT	30,533
CGC	1,137
CGA	4,108
CGG	9,585
AGA	65,835
AGG	19,879
CGU	0
TCT	46,674
TCC	35,035
TCA	38,544
TCG	7,230
AGT	46,282
AGC	1,354
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	34,151
ACC	22,967
ACA	35,696
ACG	5,698
ACU	0
GTT	15,462
GTC	14,713
GTA	15,978
GTG	24,324
GUU	0
GUC	0
GUA	0
GUG	0
TGG	77,816
UGG	0
TAT	4,139
TAC	14,585
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,129,919
(17.55%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
29,342,806
Codon	Codon count
GCT	603,092
GCC	577,866
GCA	577,137
GCG	92,578
GCU	0
TGT	642,406
TGC	7,964
UGU	0
UGC	0
GAT	327,661
GAC	198,848
GAU	0
GAA	713,655
GAG	210,641
TTT	347,936
TTC	316,097
UUU	0
UUC	0
GGT	313,640
GGC	9,249
GGA	76,523
GGG	110,313
GGU	0
CAT	169,120
CAC	301,422
CAU	0
ATT	57,181
ATC	110,183
ATA	75,054
AUU	0
AUC	0
AUA	0
AAA	357,480
AAG	68,767
CTT	113,575
CTC	282,429
CTA	85,087
CTG	81,597
TTA	39,669
TTG	27,533
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	6,297
AUG	0
AAT	13,733
AAC	65,486
AAU	0
CCT	92,480
CCC	116,839
CCA	108,562
CCG	20,064
CCU	0
CAA	47,794
CAG	128,929
CGT	26,634
CGC	1,190
CGA	4,107
CGG	8,649
AGA	68,365
AGG	21,066
CGU	0
TCT	46,086
TCC	33,357
TCA	37,942
TCG	6,134
AGT	48,088
AGC	1,247
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	36,094
ACC	23,623
ACA	34,942
ACG	4,930
ACU	0
GTT	15,226
GTC	14,250
GTA	16,924
GTG	24,901
GUU	0
GUC	0
GUA	0
GUG	0
TGG	79,293
UGG	0
TAT	3,863
TAC	14,939
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,142,595
(17.53%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
28,750,034
Codon	Codon count
GCT	577,569
GCC	532,764
GCA	551,494
GCG	85,400
GCU	0
TGT	642,736
TGC	6,818
UGU	0
UGC	0
GAT	332,618
GAC	185,897
GAU	0
GAA	702,274
GAG	205,939
TTT	361,253
TTC	321,277
UUU	0
UUC	0
GGT	300,272
GGC	8,464
GGA	73,684
GGG	101,842
GGU	0
CAT	169,277
CAC	288,254
CAU	0
ATT	60,456
ATC	113,883
ATA	80,676
AUU	0
AUC	0
AUA	0
AAA	369,358
AAG	67,830
CTT	115,930
CTC	278,173
CTA	87,469
CTG	76,355
TTA	41,749
TTG	27,054
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	6,886
AUG	0
AAT	14,690
AAC	65,061
AAU	0
CCT	86,580
CCC	110,610
CCA	103,967
CCG	18,261
CCU	0
CAA	49,621
CAG	123,869
CGT	23,679
CGC	1,064
CGA	3,598
CGG	7,303
AGA	68,710
AGG	18,910
CGU	0
TCT	45,730
TCC	33,760
TCA	37,328
TCG	6,123
AGT	45,912
AGC	1,124
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	36,447
ACC	23,079
ACA	35,086
ACG	4,673
ACU	0
GTT	15,261
GTC	13,695
GTA	16,265
GTG	22,304
GUU	0
GUC	0
GUA	0
GUG	0
TGG	77,276
UGG	0
TAT	4,240
TAC	15,436
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,040,095
(17.53%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
29,046,040
Codon	Codon count
GCT	580,582
GCC	531,418
GCA	557,558
GCG	84,070
GCU	0
TGT	657,563
TGC	6,923
UGU	0
UGC	0
GAT	335,873
GAC	184,965
GAU	0
GAA	711,375
GAG	201,237
TTT	377,158
TTC	324,556
UUU	0
UUC	0
GGT	299,062
GGC	7,820
GGA	71,535
GGG	98,702
GGU	0
CAT	173,938
CAC	293,027
CAU	0
ATT	63,439
ATC	117,456
ATA	84,904
AUU	0
AUC	0
AUA	0
AAA	380,786
AAG	69,335
CTT	117,993
CTC	274,640
CTA	86,419
CTG	75,552
TTA	42,925
TTG	27,857
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	7,094
AUG	0
AAT	15,627
AAC	67,286
AAU	0
CCT	85,451
CCC	108,567
CCA	104,514
CCG	18,078
CCU	0
CAA	50,467
CAG	124,393
CGT	24,548
CGC	1,114
CGA	3,563
CGG	7,835
AGA	69,950
AGG	18,040
CGU	0
TCT	46,436
TCC	33,052
TCA	37,713
TCG	5,717
AGT	47,376
AGC	980
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	35,897
ACC	23,048
ACA	36,211
ACG	4,948
ACU	0
GTT	15,982
GTC	14,088
GTA	17,247
GTG	22,133
GUU	0
GUC	0
GUA	0
GUG	0
TGG	78,116
UGG	0
TAT	4,363
TAC	15,778
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,093,200
(17.53%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
28,430,743
Codon	Codon count
GCT	549,378
GCC	481,781
GCA	545,059
GCG	76,618
GCU	0
TGT	665,332
TGC	6,652
UGU	0
UGC	0
GAT	331,636
GAC	176,732
GAU	0
GAA	700,371
GAG	186,826
TTT	395,429
TTC	329,011
UUU	0
UUC	0
GGT	285,225
GGC	7,231
GGA	68,913
GGG	88,436
GGU	0
CAT	175,012
CAC	283,295
CAU	0
ATT	68,755
ATC	121,396
ATA	89,439
AUU	0
AUC	0
AUA	0
AAA	396,678
AAG	68,425
CTT	118,018
CTC	262,451
CTA	87,840
CTG	68,827
TTA	43,604
TTG	27,251
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	7,587
AUG	0
AAT	16,685
AAC	68,302
AAU	0
CCT	80,068
CCC	99,157
CCA	99,712
CCG	16,887
CCU	0
CAA	51,515
CAG	118,437
CGT	23,788
CGC	1,022
CGA	3,321
CGG	6,428
AGA	70,733
AGG	16,987
CGU	0
TCT	45,574
TCC	31,532
TCA	37,262
TCG	5,824
AGT	46,140
AGC	831
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	36,841
ACC	22,357
ACA	37,213
ACG	4,514
ACU	0
GTT	16,171
GTC	13,773
GTA	16,781
GTG	21,415
GUU	0
GUC	0
GUA	0
GUG	0
TGG	75,047
UGG	0
TAT	4,759
TAC	15,962
UAU	0
UAC	0
TAA	0
TAG	1
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 4,976,002
(17.50%)

Ancient NCBI DNA:
#ERR4059477

Nucleotide Count:
30,432,235
Codon	Codon count
GCT	631,512
GCC	611,046
GCA	609,721
GCG	123,574
GCU	0
TGT	660,182
TGC	9,311
UGU	0
UGC	0
GAT	323,268
GAC	216,308
GAU	0
GAA	741,985
GAG	227,775
TTT	342,772
TTC	322,018
UUU	0
UUC	0
GGT	324,422
GGC	10,942
GGA	83,506
GGG	118,494
GGU	0
CAT	170,435
CAC	320,813
CAU	0
ATT	53,491
ATC	110,556
ATA	70,803
AUU	0
AUC	0
AUA	0
AAA	350,776
AAG	67,203
CTT	110,642
CTC	295,179
CTA	81,533
CTG	83,285
TTA	40,544
TTG	27,014
CUU	0
CUC	0
CUA	0
CUG	0
UUA	0
UUG	0
ATG	5,897
AUG	0
AAT	13,431
AAC	66,706
AAU	0
CCT	98,279
CCC	129,993
CCA	109,762
CCG	26,711
CCU	0
CAA	47,148
CAG	130,001
CGT	34,694
CGC	1,436
CGA	5,032
CGG	11,083
AGA	66,096
AGG	21,208
CGU	0
TCT	49,316
TCC	36,232
TCA	38,734
TCG	7,332
AGT	48,031
AGC	1,535
UCU	0
UCC	0
UCA	0
UCG	0
AGU	0
ACT	35,062
ACC	23,430
ACA	36,849
ACG	6,964
ACU	0
GTT	16,005
GTC	16,149
GTA	17,278
GTG	27,756
GUU	0
GUC	0
GUA	0
GUG	0
TGG	81,008
UGG	0
TAT	3,433
TAC	13,837
UAU	0
UAC	0
TAA	0
TAG	0
TGA	0
UAA	0
UAG	0
UGA	0
UGA	0

Out of frame base-pair
count: 5,335,621
(17.53%)

AE Appendix

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