Quantcast
Channel: Dredd Blog
Viewing all articles
Browse latest Browse all 3572

Appendix G GenBank - 7

$
0
0

This is an appendix to: It's In The GenBank - 7


GBFF '.seq' File Analysis
of Translation | CDS Data
and Amino Acid - Codon
Mismatches

GenBank File
and/or Version
Translation|
CDS Counts
AA - Codon
Mismatches
'gbbct214'
CP021347.1
1766|1766199
CP021358.11644|16443404
CP021376.11280|12808213
CP021377.11507|15079688
CP021384.1938|938107
CP021385.1925|925107
CP021386.1940|940105
CP021387.1933|933114
CP021388.1949|949113
CP021389.11024|1024106
CP021390.1980|980110
CP021391.11046|1046123
CP021392.1958|958117
CP021393.1989|989116
CP021394.11016|1016109
CP021416.11592|1592232
CP021420.11200|1200987
CP021421.11299|12994417
CP021422.11836|183612123
CP021427.1890|8908938
CP021430.11742|174316513
'gbbct373'
CP041879.1
1334|13342854
CP041944.11584|158410327
CP041968.1792|79214711
CP041982.1747|7473403
CP041983.1693|6943077
CP041987.1696|6962403
CP041994.11157|11574708
CP041995.1879|8792719
CP041998.1994|9943896
CP041999.11053|10533993
'gbbct66'
CP002017.1
1688|1688650
CP002018.11278|1278150
CP002024.1465|46570
CP002025.11072|107296
CP002028.11418|1418400
CP002029.1736|73675
CP002031.11578|1578246
CP002033.1595|595572
CP002034.1669|669315
CP002042.11595|1595340
CP002045.1812|812171
CP002046.11283|1283129
CP002048.11097|1097469
CP002049.11529|1529543
CP002050.11776|1776339
CP002051.1682|682272
CP002052.1428|428124
CP002054.1428|428124
CP002056.11417|1417142
CP002058.1402|4021246
CP002062.11496|1496204
CP002069.1955|955150
CP002071.1724|724131
CP002073.1776|776143
CP002074.1734|734134
CP002076.1748|748143
CP002077.1367|367771
CP002081.1891|891132
CP002082.1581|5811459
CP002084.1841|841162
CP002085.11581|1581325
CP002086.11437|1437179
CP002094.11174|1174159
CP002096.1727|727141
CP002097.2988|9886175
CP002098.1988|988258
CP002100.11259|1259242
CP002101.1954|954113
CP002102.11691|1691291
CP002103.1540|540207
CP002104.1691|691136
CP002105.11187|1187233
CP002106.1840|840153
CP002108.1415|4151414
CP002110.11361|1361219
CP002113.11252|1252194
CP002117.11476|1476140
CP002118.11890|1890346
CP002120.11303|1303202
CP002121.11058|105899
CP002124.11674|1674295
CP002131.11160|1160373
CP002154.11577|1577241
'gbbct656'
CP083671.1
1260|12604606
CP083691.11154|11544055
CP083692.11493|1493500
CP083693.1730|7302205
CP083695.11282|12821153
CP083715.11408|14084543
CP083728.11350|13504283
CP083744.11354|13547093
CP083748.1286|2874944
'gbbct368'
CP041386.1
976|97615795
CP041406.11012|10121083
CP041408.1890|8902672
'gbbct9'
AP012157.1
2008|2008413
AP012200.1933|9334350
AP012203.11081|1081166
AP012205.11660|1660271
AP012209.1719|719107
AP012210.1659|659120
AP012211.11256|1256226
AP012212.11250|1250142
AP012282.1809|8095393
AP012284.11188|11881106
AP012303.1415|415904
AP012305.1251|25134
AP012306.11727|1727168
AP012335.1967|967146
AP012336.11018|1018108
AP012342.11253|1253329
AP012344.11015|1015146
AP012489.1769|769525
AP012491.2815|815209
AP012547.11802|1802250
AP012553.126|265
AP012554.1428|42853
AP013028.1655|655211
AP013044.11429|142965
AP013045.11521|152177
AP013058.11352|1352354
AP013059.1686|686155
AP013060.1428|428121
AP013061.1596|596114
AP013062.1155|15549
'gbbct115'
CP010138.1
75|7512
CP010139.113|136
CP010141.1127|12718
CP010142.141|418
CP010144.126|265
CP010146.161|6115
CP010147.149|498
CP010149.172|7214
CP010153.126|265
CP010154.124|244
CP010155.138|383
CP010158.131|313
CP010164.127|278
CP010168.116|164
CP010173.161|6112
CP010174.193|9311
CP010179.165|6511
CP010187.1100|10018
CP010192.138|388
CP010193.144|447
CP010194.16|61
CP010197.1100|10018
'gbbct178'
CP017113.1
1413|1413203
CP017115.11278|1278198
CP017126.1396|3961543
CP017142.1977|9774506
CP017156.11151|11511114
'gbbct90'
CP007028.1
858|858132
CP007029.11616|1616367
CP007030.11090|1090147
CP007031.11632|1632295
CP007032.11367|1367366
CP007033.11355|1355350
CP007034.11127|1128381928
CP007040.11029|102952
CP007041.11002|1002121
CP007051.1870|870176
CP007055.11468|1468196
CP007060.11478|1478257
CP007062.11081|108172
CP007121.1847|847233
CP007122.11392|1392259
CP007131.1452|45253
CP007140.11054|1054192
CP007151.11502|1502304
CP007154.1299|2991011
CP007156.11035|1035318
CP007158.11859|18592121
CP007159.11817|1817280
CP007160.11477|1477291
CP007161.12090|2090506
CP007167.11470|1470286
CP007168.11486|1486282
CP007169.11493|1493286
CP007170.11422|1422264
CP007171.11419|1419264
CP007172.11336|1336276
CP007174.11762|1762395
'gbbct111'
CP009652.1
293|293863
CP009654.1870|87070
CP009676.11228|1228172
CP009681.11211|1211201
CP009694.11022|1022137
CP009709.11636|1636344
CP009716.11108|1108298
CP009748.11845|1845432
CP009749.11757|1757402
CP009755.11294|1294599
'gbbct225'
CP022682.1
1298|1298414
CP022699.11753|17537306
CP022717.11298|1298413
CP022718.11232|1232176
CP022720.11232|1232176
CP022723.1931|9318241
CP022755.11797|17976623
CP022757.11606|16067305
CP022759.11613|16135575
CP022761.11668|16684193
CP022763.11610|16105705
CP022765.11867|186710561
CP022768.11838|18387553
CP022770.11618|16183432
'gbbct550'
CP067087.1
1490|149016416
CP067090.1883|8833306
CP067112.11286|12861143
CP067113.11342|13422197
CP067134.11655|16554307
CP067169.11440|14408428
CP067225.11595|159511278
CP067334.1461|4627469
CP067336.11227|12278250
'gbbct619'
CP077107.1
1558|15582502
'gbbct1'
AB297474.1
33|336
AB450918.113|135
AB702969.173|7320
AB715422.276|769
AB910391.13|31
AB910519.13|31
AB910520.13|31
AE000511.1766|766149
AE000512.11003|1003322
AE000520.1552|552253
AE000657.1809|809155
AE000782.11178|1178279
AE000783.1372|37287
AE001273.1440|44047
AE001363.1522|52285
AE001437.11859|1859322
AE002098.21099|109971
AE002160.2453|453100
AE002161.1551|551147
AE003849.11481|1481598
AE004092.2947|94790
'gbbct360'
CP040408.1
860|8604267
CP040409.1804|8043253
CP040412.1843|8432930
CP040413.1840|8403683
CP040414.1907|9072964
CP040415.1815|8152604
CP040416.1853|8532153
CP040418.1834|8342901
CP040419.1894|8943555
CP040420.1815|8151854
CP040421.1911|9111305
CP040422.1906|9062305
CP040423.1807|8072280
CP040424.1835|8351774
CP040449.11673|16734289
CP040451.11368|136873208
CP040460.11884|18848131
CP040461.11497|14974146
CP040463.1935|9351220
CP040514.11864|18646026
'gbbct189'
CP018200.1
1926|19266696
CP018260.11509|150912409
CP018296.1472|47275
'gbbct538'
CP065477.1
836|83613949
CP065515.11388|13884093
CP065521.1973|9731447
CP065523.11234|12349995
CP065527.11287|12879136
CP065534.11703|17038503
CP065535.11277|127710356
CP065539.11785|17853161
CP065547.11290|12905345
CP065591.11753|17532484
'gbbct613'
CP076115.1
1497|149715289
CP076120.11797|17975208
CP076125.11351|1351260
CP076126.11426|1426245
CP076127.11419|1419243
'gbbct643'
CP081913.1
1510|15103898
'gbbct597'
CP074104.1
1494|1494260
CP074105.11077|10778702
CP074107.11076|10768341
CP074109.11077|10778340
CP074112.11293|12933413
CP074197.11138|11382060
'gbbct640'
CP081183.1
1209|12094387
CP081199.11570|157018198
CP081212.11748|17481725
CP081216.11696|16961563
CP081221.11800|18002380
CP081225.11703|17032342
CP081230.11723|17232476
CP081235.11739|17391324
CP081240.11708|17082421
CP081243.11781|17811863
CP081248.11680|16801886
CP081252.11671|16712283
CP081257.11738|17381818
CP081262.11698|16982121
CP081266.11704|17042519
CP081271.11716|17162246
CP081275.11696|16961207
CP081280.11699|16991077
CP081302.1309|3091460
CP081305.11566|156657723
'gbbct375'
CP042046.1
1348|13484303
CP042048.11360|13605350
CP042081.11297|12972817
CP042107.11357|13574902
CP042110.11388|13885330
CP042153.11334|13345428
CP042157.11399|14005126
CP042169.11152|11526266
CP042172.11627|16274039
CP042211.1783|78310967
CP042213.21229|12292730
CP042216.21232|12321556
CP042218.11247|124715190
CP042238.1410|4101751
CP042241.11153|11532745
CP042242.11075|10753209
'gbbct155'
CP014265.1
953|95384
CP014267.1426|4264381
CP014281.1264|2643358
'gbbct221'
CP022206.1
958|9582301
CP022242.1673|6731063
CP022247.11242|12433829
CP022271.11706|17062154
CP022278.11071|10717020
CP022290.11399|13993932
CP022291.11332|13324665
CP022298.11642|164212473
'gbbct7'
AM990992.1
784|78522174
AP006628.2463|463125
AP006840.11652|1652786
AP006861.1495|49543
AP006878.11126|1126192
AP008231.11319|1319312
AP009044.11566|1566428
AP009049.11621|1621528
AP009180.185|853
AP009256.1866|866190
AP009332.11027|1027151
AP009333.11103|1103165
'gbbct633'
CP080203.1
1467|14671394
CP080222.11362|13626757
CP080243.11606|16073082
'gbbct176'
CP016895.1
1661|16613156
CP016954.11193|11937932
'gbbct243'
CP024960.1
962|9622264
CP024962.1292|2921023
CP024964.1302|302826
CP024966.1323|3231065
CP024968.1323|3231009
CP024969.1357|3571221
CP024970.11698|16984874
CP024974.11189|118913646
CP024998.11305|13053036
CP025000.11149|11491231
CP025023.11271|12716144
CP025043.11096|10967060
'gbbct129'
CP011535.2
954|954110
CP011536.11176|1176182
CP011538.1305|305824
CP011541.11231|1231269
CP011542.11584|1584327
CP011545.11287|1287319
CP011546.11063|1063252
CP011564.11084|1084164
'gbbct236'
CP024016.1
766|76614366
CP024017.1769|76915097
CP024021.1782|78212116
CP024022.1782|78212118
CP024023.1782|78212117
CP024049.1324|3242624
CP024050.1968|9686382
CP024071.1783|78312181
CP024072.1783|78312125
CP024073.1783|78312121
CP024074.1781|78112526
CP024075.1783|78312123
CP024076.1782|78212128
CP024077.1783|78312121
CP024078.1783|78312178
CP024079.1783|78312119
CP024124.11920|1920155
CP024126.11148|11488235
'gbbct169'
CP016044.2
1649|164919767
CP016073.11297|129711727
CP016095.11381|1381201
CP016175.1863|8632802
CP016180.11003|10042656
'gbbct588'
CP072789.1
1657|16571772
CP072793.11777|17772485
CP072828.1645|645263
CP072829.1789|7891908
CP072837.11186|1186672
CP072842.11282|12821338
CP072843.11776|17763574
CP072851.11831|18311578
CP072875.11474|14741322
CP072876.11133|113459655
CP072878.11214|12143637
CP072881.11139|11397762
CP072884.11217|12174986
CP072888.11509|15094192
CP072891.11190|119012921
CP072894.11183|11835837
CP072897.1779|7797358
CP072898.1736|7364602
CP072900.1721|7214736
CP072901.1744|7446397
'gbbct604'
CP075052.1
1899|18993427
CP075054.11872|18722868
CP075055.11831|18313224
CP075076.1411|411876
'gbbct582'
CP071914.1
1569|15693316
CP071931.11394|13947731
CP071958.11242|12425259
CP071973.11574|157411448
CP071974.1940|9401430
CP071975.1741|7415125
CP071977.1710|7107339
CP071978.1731|7316838
CP071981.1726|7267767
CP071982.1705|7054200
CP071984.1746|7467792
CP071985.1709|7095279
CP071986.1737|7377647
CP071987.1719|7195890
CP071994.11217|12174646
CP071996.11173|117313604
CP072012.1620|6206973
CP072017.11277|12771432
CP072018.11231|12311393
CP072019.11372|13721178
CP072020.11135|11351919
CP072021.11346|13462308
CP072022.11357|1357982
CP072023.11189|11891188
CP072024.11182|11821577
CP072025.11359|13592152
CP072026.11180|11801636
CP072027.11384|13841430
CP072028.11173|11732692
CP072029.11100|11001078
CP072030.11220|12202578
CP072032.11211|12114086
CP072034.11225|12253444
CP072035.11244|12442139
CP072036.11285|12851010
CP072037.11228|12281662
'gbbct142'
CP012805.1
974|974105
CP012808.11337|13371601
CP012836.11621|1621108
CP012849.1203|203187
CP012873.11178|1178277
CP012889.1962|96236
CP012890.1944|9444512
CP012897.11678|16783071
CP012898.11593|15931914
CP012907.1705|7051702
CP012911.1995|995988
CP012920.1729|729790
CP012939.11719|17191713
CP012943.11499|14991654
CP012957.1820|8201212
CP012968.11356|1356216
'gbbct85'
CP006009.1
647|647111
CP006010.1652|652120
CP006011.1907|907163
CP006018.1613|61379
CP006019.11073|1073129
CP006030.11455|1455249
CP006032.11115|1115328
CP006033.11355|1355235
CP006044.11268|1268196
CP006046.41501|15012405
CP006047.21409|1409231
CP006059.182|8289
CP006060.1106|1066
CP006246.11077|1077119
CP006265.11284|128477
CP006269.11536|1536431
CP006270.11367|1367383
CP006271.11398|1398437
CP006365.1913|913268
CP006366.1888|888174
CP006367.11698|1698272
CP006471.11339|1339263
CP006571.1477|477161
CP006573.11123|112376
CP006574.11398|139898
CP006576.11717|1717114
CP006577.11248|1248189
'gbbct103'
CP008926.1
675|676185073
CP008934.11419|1419267
CP008936.1689|689125
CP008944.1724|724250
CP008985.1352|35260
CP008986.1126|12613
'gbbct228'
CP023067.1
1884|1884394
CP023070.12026|2026401
CP023074.11237|12372718
CP023076.11294|12945828
CP023140.11718|17186489
CP023154.1985|9853000
CP023173.1341|3411834
CP023189.11417|14177396
CP023192.1928|928106
CP023193.1926|926107
CP023194.1926|926107
CP023195.1926|926106
CP023196.1925|925105
CP023197.1924|924105
CP023198.11087|1087141
CP023199.11032|1032108
'gbbct62'
CP001389.1
1849|1849253
CP001391.1494|49450
CP001392.11759|1759118
CP001393.11350|1350307
CP001397.11891|1891253
CP001398.11012|1012296
CP001399.11429|1429349
CP001400.11318|1318323
CP001401.11362|1362323
CP001402.11390|1390327
CP001403.11506|1506386
CP001404.11386|1386319
CP001409.11087|108784
CP001431.1461|461114
CP001463.11036|1036252
CP001515.1788|788118
CP001561.11042|10426219
CP001562.1892|89291
CP001582.1758|758153
CP001584.1479|47980
CP001600.21881|1881336
CP001601.11181|1181297
CP001602.21477|1477275
CP001604.11437|1437266
CP001605.1136|1369
CP001606.1788|788118
CP001607.11194|1194132
CP001612.1528|52877
CP001615.11507|1507219
CP001616.11494|1494117
CP001617.11488|1488307
CP001620.1902|902240
CP001628.11189|1189360
CP001629.11691|1691169
CP001631.1992|992445
CP001632.11151|115148
CP001633.11002|1002135
CP001634.1980|980288
'gbbct91'
CP007176.1
1274|1274222
CP007179.1789|789118
CP007181.1870|870119
CP007183.1844|844125
CP007188.1946|946122
CP007189.1787|78795
CP007190.1787|78795
CP007191.1825|825102
CP007192.1828|828101
CP007193.1820|820100
CP007194.11442|1442268
CP007195.11442|1442268
CP007196.11443|1443271
CP007197.11429|1429271
CP007198.11429|1429270
CP007199.11374|1374257
CP007200.11375|1375258
CP007201.11658|1658237
CP007202.11240|1240115
CP007204.1954|95457
CP007206.11134|113495
CP007207.11116|111695
CP007208.11137|1137189
CP007210.11391|1391276
CP007217.1435|43558
CP007223.1820|820228
CP007229.1412|4121247
CP007234.1141|1416
'gbbct383'
CP043118.1
1814|181428232
CP043122.11817|181727687
CP043123.11817|181728179
CP043124.11818|181828102
CP043125.11815|181528140
CP043126.11701|170258146
CP043127.11811|181130727
CP043128.11815|181528913
CP043129.11815|181528285
CP043130.11414|141454541
CP043131.11816|181628665
CP043132.11813|181328467
CP043133.11817|181727912
CP043134.11818|181828143
CP043135.11817|181728157
CP043136.11817|181728057
CP043137.11818|181827952
CP043138.11815|181527806
CP043141.11818|181827903
CP043142.11818|181827863
CP043143.11818|181827863
CP043146.11617|161725169
CP043147.11590|159024754
CP043148.11816|181627949
CP043149.11816|181627992
CP043150.11817|181728262
CP043151.11813|181328723
CP043152.11818|181828157
CP043153.11816|181628285
CP043154.11644|164426701
CP043156.11814|181429128
CP043157.11816|181628284
CP043158.11817|181728285
CP043160.11817|181727826
'gbbct77'
CP003362.1
1189|1189130
CP003372.11868|1868153
CP003375.1686|686103
CP003377.11918|1918174
CP003378.1749|749290
CP003380.11303|1303164
CP003382.11869|1869461
CP003385.11019|1019302
CP003388.1975|97545
CP003390.31507|15074181
CP003391.1432|43231
CP003392.1433|43333
CP003393.1433|43332
CP003395.1422|42230
CP003396.1424|42433
CP003397.1390|39035
CP003398.1394|39434
CP003407.11051|1051320
CP003408.1868|868308
CP003409.1761|761273
CP003412.12090|2090520
CP003414.11379|1379284
CP003418.11616|1616189
CP003419.1689|689151
CP003421.41045|10457952
CP003423.1661|661232
CP003426.1432|43274
CP003467.196|965
CP003468.1213|21321
CP003472.1753|753136
CP003473.1747|747133
CP003474.1747|747125
CP003475.1716|716137
CP003476.1703|703124
CP003479.1807|807143
CP003481.1733|733129
CP003483.1714|714136
CP003486.1704|704138
CP003490.11365|1365122
CP003495.11641|1641337
CP003497.1769|769144
CP003498.1775|775145
CP003499.1946|946182
CP003500.11812|1812146
CP003504.11376|1376258
CP003506.1380|3801063
CP003507.1375|3751047
CP003508.1388|3881111
CP003509.1377|3771052
CP003510.1371|3711018
CP003511.1367|367991
CP003512.1385|3851082
CP003513.1365|3651002
CP003531.1746|746380
CP003532.11381|1381421
CP003534.1839|83992
CP003535.1268|2686
CP003537.11346|1346138
CP003538.11088|1088157
CP003539.1754|754279
'gbbct209'
CP020653.1
1867|186724218
CP020656.11250|12504566
CP020694.11567|15672744
CP020705.1989|9892910
CP020713.11529|15298176
CP020714.11540|15408748
CP020741.11374|13745696
CP020742.1758|7588687
CP020774.11385|13852853
CP020776.1884|8845053
CP020805.11799|17995235
'gbbct353'
CP039291.1
1566|15667019
CP039297.11838|18383442
CP039339.11759|17597140
CP039373.11520|15206813
CP039375.11520|15203487
CP039377.11827|18274478
CP039378.1874|8744225
CP039380.11786|178622328
CP039381.11128|11283091
CP039382.11456|14563209
CP039383.21338|13386267
CP039424.11377|13779177
CP039434.11250|125011093
CP039435.11540|15403603
CP039448.11382|13824445
'gbbct18'
AP019551.1
966|966245
'gbbct517'
CP062147.1
1422|14224467
CP062196.11465|14653875
CP062221.11752|17523778
'gbbct518'
CP062265.1
1319|13195077
CP062279.11224|122439310
CP062310.1927|9271000
'gbbct409'
CP046863.1
1103|11033430
CP046898.11728|17283687
'gbbct40'
AP025196.1
1107|1107149
AP025204.1846|846107
'gbbct69'
CP002416.1
1432|1432271
CP002419.1952|9524006
CP002420.11071|10717349
CP002421.1935|9354232
CP002422.11076|10765147
CP002423.11061|10618445
CP002424.1980|9807705
CP002425.11340|1340319
CP002426.11406|1406331
CP002427.1928|928309
CP002428.1584|58489
CP002429.1921|921303
CP002431.11692|1692180
CP002432.11280|1280200
CP002439.11147|1147155
CP002442.11559|1559298
CP002444.1858|858279
CP002446.11485|1485171
CP002452.11105|1105153
CP002454.11605|1605335
CP002455.11006|100679
CP002456.1780|78076
CP002458.1529|5291675
CP002461.1577|577207
CP002464.1936|936106
CP002465.1981|98194
CP002466.11162|1162238
CP002471.1841|84195
CP002472.11475|1475240
CP002478.11286|1286158
CP002491.11410|1410206
CP002511.1685|68586
CP002512.1894|894146
CP002513.1421|4211268
CP002525.1498|4982072
CP002528.11472|1472153
CP002529.11164|1164301
CP002534.11744|1744118
CP002535.11146|1146232
CP002536.1974|974159
CP002541.11512|1512136
CP002543.1815|815180

Viewing all articles
Browse latest Browse all 3572

Trending Articles