GC-8 Appendix AVG

This is an appendix to: On The Origin Of A Genetic Constant - 8

GenBank Genome Files
Average Variations
Analysis Report

after processing 100,000 genomes:

Sample genome HTML tables
showing AVG variation
summaries for this section:

GenBank Genome
Table: 500001
(v= <1 [0.1684%])
**URL Link:** AC133204.3

**Genome info for AC133204.3**:

AC133204 224181 bp DNA linear ROD 25-NOV-2003 Mus musculus BAC clone RP23-106N3 from chromosome 5 complete

**Nucleotide count:** 224,181
Atom	Atom Count	Percent
Carbon	1,071,062	32.3550
Hydrogen	1,178,966	35.6146
Nitrogen	847,036	25.5875
Oxygen	213,284	6.4429
Totals	3,310,348	~100.00

GenBank Genome
Table: 1
(v= <1 [0.2719%])
**URL Link:** LR862133.1

**Genome info for LR862133.1**:

LR862133 18411140 bp DNA linear PLN 28-JUL-2020 Ananas comosus var. bracteatus genome assembly
chromosome: 5.

**Nucleotide count:** 18,405,240
Non-Nucleotide Count: 5,900
Atom	Atom Count	Percent
Carbon	88,541,178	32.4808
Hydrogen	97,752,075	35.8597
Nitrogen	67,878,531	24.9008
Oxygen	18,424,038	6.7587
Totals	272,595,822	~100.00

GenBank Genome
Table: 6234
(v= >1 <2 [1.0785%])
**URL Link:** LR905064.1

**Genome info for LR905064.1**:

LR905064 14426 bp DNA linear INV 24-NOV-2020 Darwinula stevensoni.

**Nucleotide count:** 14,426
Atom	Atom Count	Percent
Carbon	69,819	32.7286
Hydrogen	78,088	36.6048
Nitrogen	49,634	23.2666
Oxygen	15,786	7.3999
Totals	213,327	~100.00

GenBank Genome
Table: 92511
(v= >2 <3 [2.3246%])
**URL Link:** MK361035.1

**Genome info for MK361035.1**:

MK361035 10487 bp DNA circular INV 25-NOV-2019 Beroe cucumis mitochondrion
complete genome.

**Nucleotide count:** 10,487
Atom	Atom Count	Percent
Carbon	51,400	32.9194
Hydrogen	58,411	37.4096
Nitrogen	32,437	20.7744
Oxygen	13,891	8.8966
Totals	156,139	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 99,560

variation count:
@ <2.0% = 439

variation count:
@ <3.0% = 1

variation count:
@ <4.0% = 0

variation count:
@ >=4.0% = 0

after processing 200,000 genomes:

Sample genome HTML tables
showing AVG variation
summaries for this section:

GenBank Genome
Table: 100001
(v= <1 [0.3136%])
**URL Link:** OD565703.1

**Genome info for OD565703.1**:

OD565703 160245 bp DNA linear INV 11-DEC-2020 4 Tbi b3v08.

**Nucleotide count:** 154,008
Non-Nucleotide Count: 6,237
Atom	Atom Count	Percent
Carbon	743,062	32.5406
Hydrogen	819,390	35.8832
Nitrogen	568,034	24.8757
Oxygen	153,003	6.7004
Totals	2,283,489	~100.00

GenBank Genome
Table: 103116
(v= >1 <2 [1.1441%])
**URL Link:** OC917970.1

**Genome info for OC917970.1**:

OC917970 11508 bp DNA linear INV 25-JAN-2021 Oppiella nova.

**Nucleotide count:** 11,508
Atom	Atom Count	Percent
Carbon	55,876	32.6699
Hydrogen	62,421	36.4967
Nitrogen	39,569	23.1354
Oxygen	13,166	7.6980
Totals	171,032	~100.00

GenBank Genome
Table: 105813
(v= >2 <3 [2.2322%])
**URL Link:** MZ636522.1

**Genome info for MZ636522.1**:

MZ636522 13647 bp DNA circular INV 31-AUG-2022 Dipetalonema gracile mitochondrion
complete genome.

**Nucleotide count:** 13,647
Atom	Atom Count	Percent
Carbon	67,325	32.7518
Hydrogen	76,012	36.9778
Nitrogen	43,084	20.9592
Oxygen	19,140	9.3111
Totals	205,561	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 96,781

variation count:
@ <2.0% = 3,211

variation count:
@ <3.0% = 8

variation count:
@ <4.0% = 0

variation count:
@ >=4.0% = 0

after processing 300,000 genomes:

Sample genome HTML tables
showing AVG variation
summaries for this section:

GenBank Genome
Table: 200001
(v= <1 [0.2079%])
**URL Link:** EA695480.1

**Genome info for EA695480.1**:

EA695480 14337 bp DNA linear PAT 10-JUN-2008 Sequence 74359 from patent US 7365185.

**Nucleotide count:** 14,337
Atom	Atom Count	Percent
Carbon	68,750	32.3906
Hydrogen	75,474	35.5585
Nitrogen	54,448	25.6524
Oxygen	13,581	6.3985
Totals	212,253	~100.00

GenBank Genome
Table: 202972
(v= >1 <2 [1.0673%])
**URL Link:** EA740987.1

**Genome info for EA740987.1**:

EA740987 10907 bp DNA linear PAT 10-JUN-2008 Sequence 12433 from patent US 7368527.

**Nucleotide count:** 10,907
Atom	Atom Count	Percent
Carbon	52,319	32.3758
Hydrogen	58,691	36.3189
Nitrogen	37,635	23.2891
Oxygen	12,954	8.0161
Totals	161,599	~100.00

GenBank Genome
Table: 235994
(v= >2 <3 [2.0835%])
**URL Link:** FV536683.1

**Genome info for FV536683.1**:

FV536683 10359 bp DNA linear PAT 18-MAR-2010 Modified Microbial Nucleic Acid.

**Nucleotide count:** 10,359
Atom	Atom Count	Percent
Carbon	51,795	32.8822
Hydrogen	57,899	36.7573
Nitrogen	33,483	21.2568
Oxygen	14,340	9.1038
Totals	157,517	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 99,021

variation count:
@ <2.0% = 975

variation count:
@ <3.0% = 4

variation count:
@ <4.0% = 0

variation count:
@ >=4.0% = 0

after processing 400,000 genomes:

Sample genome HTML tables
showing AVG variation
summaries for this section:

GenBank Genome
Table: 300001
(v= <1 [0.1358%])
**URL Link:** MX519141.1

**Genome info for MX519141.1**:

MX519141 11326 bp DNA linear PAT 28-JUN-2021 Sequence 2781 from patent US 10961585.

**Nucleotide count:** 11,326
Atom	Atom Count	Percent
Carbon	53,376	32.0309
Hydrogen	59,147	35.4941
Nitrogen	42,571	25.5468
Oxygen	11,545	6.9282
Totals	166,639	~100.00

GenBank Genome
Table: 301529
(v= >1 <2 [1.2606%])
**URL Link:** MI279662.1

**Genome info for MI279662.1**:

MI279662 11127 bp DNA linear PAT 12-FEB-2018 Sequence 21784 from patent US 9827332.

**Nucleotide count:** 11,127
Atom	Atom Count	Percent
Carbon	52,077	31.7514
Hydrogen	56,530	34.4664
Nitrogen	45,834	27.9450
Oxygen	9,574	5.8373
Totals	164,015	~100.00

GenBank Genome
Table: 317731
(v= >3 <4 [3.1228%])
**URL Link:** MQ014117.1

**Genome info for MQ014117.1**:

MQ014117 22500 bp DNA linear PAT 18-MAY-2021 Sequence 23 from Patent EP3717009.

**Nucleotide count:** 22,500
Atom	Atom Count	Percent
Carbon	108,000	32.8767
Hydrogen	126,000	38.3562
Nitrogen	63,000	19.1781
Oxygen	31,500	9.5890
Totals	328,500	~100.00

GenBank Genome
Table: 374519
(v= >2 <3 [2.4758%])
**URL Link:** AP015624.1

**Genome info for AP015624.1**:

AP015624 19638 bp DNA linear PLN 03-DEC-2015 Vigna angularis var. angularis DNA scaffold: Scaffold 0580

**Nucleotide count:** 19,638
Atom	Atom Count	Percent
Carbon	94,239	31.7826
Hydrogen	98,264	33.1401
Nitrogen	90,066	30.3753
Oxygen	13,942	4.7020
Totals	296,511	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 99,401

variation count:
@ <2.0% = 595

variation count:
@ <3.0% = 3

variation count:
@ <4.0% = 1

variation count:
@ >=4.0% = 0

after processing 500,000 genomes:

Sample genome HTML tables
showing AVG variation
summaries for this section:

GenBank Genome
Table: 400001
(v= <1 [0.4358%])
**URL Link:** MH064508.1

**Genome info for MH064508.1**:

MH064508 117444 bp DNA circular PLN 08-JUN-2019 Radula japonica voucher 16-8723 chloroplast complete genome.

**Nucleotide count:** 117,444
Atom	Atom Count	Percent
Carbon	569,471	32.6497
Hydrogen	628,230	36.0185
Nitrogen	428,692	24.5783
Oxygen	117,794	6.7535
Totals	1,744,187	~100.00

GenBank Genome
Table: 403520
(v= >1 <2 [1.2166%])
**URL Link:** MZ748319.1

**Genome info for MZ748319.1**:

MZ748319 19912 bp DNA circular PLN 23-MAR-2022 Galdieria sp. strain ACUF 613 mitochondrion complete genome.

**Nucleotide count:** 19,912
Atom	Atom Count	Percent
Carbon	98,326	32.3620
Hydrogen	103,872	34.1873
Nitrogen	84,156	27.6982
Oxygen	17,478	5.7525
Totals	303,832	~100.00

GenBank Genome
Table: 420094
(v= >2 <3 [2.0278%])
**URL Link:** MN366148.1

**Genome info for MN366148.1**:

MN366148 10410 bp DNA linear PLN 10-FEB-2021 UNVERIFIED: Phalaenopsis aphrodite subsp. formosana clone Contig 17

**Nucleotide count:** 10,410
Atom	Atom Count	Percent
Carbon	48,410	32.3419
Hydrogen	56,312	37.6211
Nitrogen	31,984	21.3680
Oxygen	12,976	8.6690
Totals	149,682	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 99,890

variation count:
@ <2.0% = 109

variation count:
@ <3.0% = 1

variation count:
@ <4.0% = 0

variation count:
@ >=4.0% = 0

after processing 600,000 genomes:

Sample genome HTML tables
showing AVG variation
summaries for this section:

GenBank Genome
Table: 500001
(v= <1 [0.1684%])
**URL Link:** AC133204.3

**Genome info for AC133204.3**:

AC133204 224181 bp DNA linear ROD 25-NOV-2003 Mus musculus BAC clone RP23-106N3 from chromosome 5 complete

**Nucleotide count:** 224,181
Atom	Atom Count	Percent
Carbon	1,071,062	32.3550
Hydrogen	1,178,966	35.6146
Nitrogen	847,036	25.5875
Oxygen	213,284	6.4429
Totals	3,310,348	~100.00

GenBank Genome
Table: 516503
(v= >2 <3 [2.2540%])
**URL Link:** MF597730.1

**Genome info for MF597730.1**:

MF597730 10830 bp DNA linear ROD 04-AUG-2017 Mus musculus chromosome X WGS contig MG104 gap closure genomic

**Nucleotide count:** 10,830
Atom	Atom Count	Percent
Carbon	52,672	31.9918
Hydrogen	54,788	33.2770
Nitrogen	49,280	29.9316
Oxygen	7,902	4.7995
Totals	164,642	~100.00

GenBank Genome
Table: 534038
(v= >1 <2 [1.0598%])
**URL Link:** AC140396.3

**Genome info for AC140396.3**:

AC140396 109575 bp DNA linear ROD 29-MAY-2004 Mus musculus BAC clone RP24-184N24 from chromosome Y complete

**Nucleotide count:** 109,575
Atom	Atom Count	Percent
Carbon	530,504	32.4881
Hydrogen	570,549	34.9405
Nitrogen	445,111	27.2586
Oxygen	86,754	5.3128
Totals	1,632,918	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 99,957

variation count:
@ <2.0% = 40

variation count:
@ <3.0% = 3

variation count:
@ <4.0% = 0

variation count:
@ >=4.0% = 0

after processing 700,000 genomes:

Sample genome HTML tables
showing AVG variation
summaries for this section:

GenBank Genome
Table: 600001
(v= <1 [0.1939%])
**URL Link:** JX684087.1

**Genome info for JX684087.1**:

JX684087 41468 bp DNA linear ENV 26-APR-2013 Uncultured organism clone FLSS-21 genomic sequence.

**Nucleotide count:** 41,468
Atom	Atom Count	Percent
Carbon	195,141	32.0406
Hydrogen	215,920	35.4524
Nitrogen	157,202	25.8114
Oxygen	40,779	6.6956
Totals	609,042	~100.00

GenBank Genome
Table: 600781
(v= >1 <2 [1.1010%])
**URL Link:** CP021571.1

**Genome info for CP021571.1**:

CP021571 11301 bp DNA circular ENV 08-JAN-2019 Unidentified plasmid plasmid MO1-2 2829 complete sequence.

**Nucleotide count:** 11,301
Atom	Atom Count	Percent
Carbon	54,070	32.5637
Hydrogen	60,864	36.6553
Nitrogen	38,558	23.2216
Oxygen	12,552	7.5594
Totals	166,044	~100.00

GenBank Genome
Table: 613004
(v= >2 <3 [2.0099%])
**URL Link:** JQ316200.1

**Genome info for JQ316200.1**:

JQ316200 13641 bp DNA circular INV 24-MAR-2012 Wuchereria bancrofti mitochondrion complete genome.

**Nucleotide count:** 13,592
Non-Nucleotide Count: 49
Atom	Atom Count	Percent
Carbon	66,986	32.7725
Hydrogen	75,381	36.8797
Nitrogen	43,749	21.4039
Oxygen	18,281	8.9439
Totals	204,397	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 98,240

variation count:
@ <2.0% = 1,725

variation count:
@ <3.0% = 35

variation count:
@ <4.0% = 0

variation count:
@ >=4.0% = 0

after processing 800,000 genomes:

Sample genome HTML tables
showing AVG variation
summaries for this section:

GenBank Genome
Table: 700001
(v= <1 [0.3967%])
**URL Link:** CP014211.1

**Genome info for CP014211.1**:

CP014211 4106512 bp DNA circular BCT 17-DEC-2019 Bordetella pertussis strain J377 chromosome complete genome.

**Nucleotide count:** 4,106,512
Atom	Atom Count	Percent
Carbon	19,140,791	31.7939
Hydrogen	21,196,927	35.2093
Nitrogen	15,755,921	26.1715
Oxygen	4,109,066	6.8254
Totals	60,202,705	~100.00

GenBank Genome
Table: 700621
(v= >1 <2 [1.0848%])
**URL Link:** CP009334.1

**Genome info for CP009334.1**:

CP009334 349601 bp DNA circular BCT 26-JUL-2016 Bacillus thuringiensis strain HD1011 plasmid 2 complete sequence.

**Nucleotide count:** 349,601
Atom	Atom Count	Percent
Carbon	1,677,817	32.5787
Hydrogen	1,884,682	36.5954
Nitrogen	1,197,598	23.2541
Oxygen	389,952	7.5718
Totals	5,150,049	~100.00

GenBank Genome
Table: 786399
(v >=4 [4.3408%])
**URL Link:** CP045289.2

**Genome info for CP045289.2**:

CP045289 25142 bp DNA circular BCT 06-MAR-2020 Curtobacterium flaccumfaciens pv. flaccumfaciens strain P990

**Nucleotide count:** 25,142
Atom	Atom Count	Percent
Carbon	118,003	32.5860
Hydrogen	142,266	39.2861
Nitrogen	60,628	16.7421
Oxygen	41,231	11.3858
Totals	362,128	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 99,913

variation count:
@ <2.0% = 86

variation count:
@ <3.0% = 0

variation count:
@ <4.0% = 0

variation count:
@ >=4.0% = 1

after processing 900,000 genomes:

Sample genome HTML tables
showing AVG variation
summaries for this section:

GenBank Genome
Table: 800001
(v= <1 [0.0528%])
**URL Link:** CP057830.1

**Genome info for CP057830.1**:

CP057830 61278 bp DNA circular BCT 13-MAY-2022 Escherichia coli strain RHB13-C18 plasmid pRHB13-C18 2 complete

**Nucleotide count:** 61,278
Atom	Atom Count	Percent
Carbon	291,362	32.2487
Hydrogen	322,125	35.6536
Nitrogen	229,129	25.3606
Oxygen	60,869	6.7371
Totals	903,485	~100.00

GenBank Genome
Table: 800233
(v= >1 <2 [1.0316%])
**URL Link:** CP051757.1

**Genome info for CP051757.1**:

CP051757 20671 bp DNA circular BCT 01-DEC-2020 Sarcina sp. JB2 plasmid p3 complete sequence.

**Nucleotide count:** 20,671
Atom	Atom Count	Percent
Carbon	100,807	32.8231
Hydrogen	112,193	36.5304
Nitrogen	71,745	23.3604
Oxygen	22,377	7.2860
Totals	307,122	~100.00

GenBank Genome
Table: 819779
(v= >2 <3 [2.3151%])
**URL Link:** CP095532.1

**Genome info for CP095532.1**:

CP095532 14577 bp DNA linear BCT 05-DEC-2022 Escherichia coli strain GN06156 plasmid unnamed1.

**Nucleotide count:** 14,577
Atom	Atom Count	Percent
Carbon	71,294	32.5927
Hydrogen	80,958	37.0107
Nitrogen	45,484	20.7934
Oxygen	21,006	9.6031
Totals	218,742	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 99,821

variation count:
@ <2.0% = 178

variation count:
@ <3.0% = 1

variation count:
@ <4.0% = 0

variation count:
@ >=4.0% = 0

after processing 1,000,000 genomes:

Sample genome HTML tables
showing AVG variation
summaries for this section:

GenBank Genome
Table: 900001
(v= <1 [0.1424%])
**URL Link:** AC016793.3

**Genome info for AC016793.3**:

AC016793 96138 bp DNA linear HTG 15-DEC-1999 Drosophila melanogaster strain y chromosome 2 clone BACR33K22

**Nucleotide count:** 91,171
Non-Nucleotide Count: 4,967
Atom	Atom Count	Percent
Carbon	435,426	32.3266
Hydrogen	481,317	35.7336
Nitrogen	338,611	25.1389
Oxygen	91,606	6.8009
Totals	1,346,960	~100.00

GenBank Genome
Table: 901169
(v= >1 <2 [1.1137%])
**URL Link:** AC019006.3

**Genome info for AC019006.3**:

AC019006 149651 bp DNA linear HTG 16-MAR-2000 Homo sapiens chromosome 8 clone RP11-458N4 map 8 WORKING DRAFT

**Nucleotide count:** 148,150
Non-Nucleotide Count: 1,501
Atom	Atom Count	Percent
Carbon	724,599	32.4130
Hydrogen	772,412	34.5518
Nitrogen	613,462	27.4416
Oxygen	125,045	5.5936
Totals	2,235,518	~100.00

GenBank Genome
Table: 918032
(v= >2 <3 [2.0842%])
**URL Link:** AC027353.4

**Genome info for AC027353.4**:

AC027353 101509 bp DNA linear HTG 26-SEP-2000 Homo sapiens chromosome 16 clone RP11-167D21 WORKING DRAFT

**Nucleotide count:** 71,328
Non-Nucleotide Count: 30,181
Atom	Atom Count	Percent
Carbon	349,107	32.2159
Hydrogen	363,652	33.5581
Nitrogen	320,538	29.5795
Oxygen	50,351	4.6464
Totals	1,083,648	~100.00

GenBank Genome
Table: 994274
(v= >3 <4 [3.0781%])
**URL Link:** LN006378.1

**Genome info for LN006378.1**:

LN006378 14473 bp DNA linear INV 07-OCT-2014 Spirometra erinaceieuropaei genome assembly S erinaceieuropaei

**Nucleotide count:** 11,935
Non-Nucleotide Count: 2,538
Atom	Atom Count	Percent
Carbon	54,428	32.2485
Hydrogen	65,229	38.6480
Nitrogen	32,519	19.2674
Oxygen	16,601	9.8361
Totals	168,777	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 99,924

variation count:
@ <2.0% = 72

variation count:
@ <3.0% = 3

variation count:
@ <4.0% = 1

variation count:
@ >=4.0% = 0

Total processed 1,052,789 genomes:

Variation totals for all sections:

variation count:
@ <1.0% = 1,045,196
(99.2788%)

variation count:
@ <2.0% = 7,529
(0.7151%)

variation count:
@ <3.0% = 61
(0.0058%)

variation count:
@ <4.0% = 2
(0.0002%)

variation count:
@ >=4.0% = 1
(0.0001%)

GC-8 Appendix AVG

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