Quantcast
Channel: Dredd Blog
Viewing all articles
Browse latest Browse all 3572

Appendix HMCITTL

$
0
0

This is an appendix to: How Microbes Communicate In The Tiniest Language - 2


To search for the GenBank data in the following table:

1) choose a human or microbe in the table below
2) copy its "GenBank Index Key" column's data
3) click on this link
4) enter that index key data in the search line
5) press the "Search" button
6) GenBank info will appear for your perusal
7) select the "FASTA" link to view the nucleotides



Gene DNA Comparisons (human/microbe)

Definitions:

'Taxonomic Unit Name': 'taxonomic name' of microbe or human;
'GenBank Index Key': the human/microbe GenBank database unique identity;
'Nucleotide Size': number of ACGT molecules in DNA;
'Gene Count': number of genes in the DNA;
'Human Gene Segs In Microbe':
number of human gene DNA segments (10 bp) in microbe DNA;
'Microbe Gene Segs In Human':
number of microbe gene DNA segments (10 bp) in human DNA.


GenBank Data: (enter the GenBank Index Key; select FASTA version)

Taxonomic Unit NameGenBank
Index Key
Nucleotide
Size
Gene
Count
Human
Gene Segs
In Microbe
Microbe
Gene Segs
In Human
Homo sapiens (human)NW_003871055.37,283,150214--------
Staphylococcus debuckiiNZ_CP033460.12,691,8502,600579471
Mycoplasma mycoidesNZ_CP001668.11,084,5869001,391989
Staphylococcus haemolyticusNZ_CP013911.12,549,3382,509634496
Rathayibacter tanacetiNZ_CP047186.13,214,1203,044273230
Rathayibacter festucaeNZ_CP047180.14,219,9973,859330260
Pasteurella canisNZ_CP085791.12,298,7912,183722628
Staphylococcus aureusNC_007795.12,821,3612,872883675
Moraxella bovisCP030241.12,839,9132,881618448
Pseudomonas aeruginosaNC_002516.26,264,4045,697375291
Pseudomonas brassicacearumNZ_CP034725.16,738,5446,023382315
Psychrobacter alimentariusCP014945.13,332,5392,742574454
Pseudomonas amygdaliNZ_CP042804.16,133,5585,439432316
Pseudomonas adelgestsugasNZ_CP026512.11,835,598904531409
Acetobacter ascendensNZ_CP021524.12,901,8462,682463366
Mycoplasma capricolumNC_007633.11,010,0238781,232941
Pasteurella atlanticaNZ_CP074346.12,301,6492,209735587
Pasteurella canisCP083262.12,301,0942,194677539
Shewanella aestuariiCP050313.14,029,2103,506417350
Shewanella aestuariiNZ_CP050313.14,029,2103,510417353
Pasteurella dagmatisLT906448.12,287,2132,088604470
Homo sapiens (human)NC_000020.1063,025,5201,059--------
Staphylococcus debuckiiNZ_CP033460.12,691,8502,6004,8513,619
Mycoplasma mycoidesNZ_CP001668.11,084,5869009,0045,670
Staphylococcus haemolyticusNZ_CP013911.12,549,3382,5094,8963,897
Rathayibacter tanacetiNZ_CP047186.13,214,1203,0442,0452,007
Rathayibacter festucaeNZ_CP047180.14,219,9973,8592,2141,983
Pasteurella canisNZ_CP085791.12,298,7912,1834,9923,869
Staphylococcus aureusNC_007795.12,821,3612,8725,3853,802
Moraxella bovisCP030241.12,839,9132,8813,7902,888
Pseudomonas aeruginosaNC_002516.26,264,4045,6972,7842,440
Pseudomonas brassicacearumNZ_CP034725.16,738,5446,0233,2512,696
Psychrobacter alimentariusCP014945.13,332,5392,7423,9903,309
Pseudomonas amygdaliNZ_CP042804.16,133,5585,4393,1512,663
Pseudomonas adelgestsugasNZ_CP026512.11,835,5989043,5362,796
Acetobacter ascendensNZ_CP021524.12,901,8462,6823,5952,982
Mycoplasma capricolumNC_007633.11,010,0238788,2965,681
Pasteurella atlanticaNZ_CP074346.12,301,6492,2095,4684,127
Pasteurella canisCP083262.12,301,0942,1944,8163,604
Shewanella aestuariiCP050313.14,029,2103,5063,8563,134
Shewanella aestuariiNZ_CP050313.14,029,2103,5104,1523,329
Pasteurella dagmatisLT906448.12,287,2132,0885,4184,075
Homo sapiens (human)NC_000021.848,129,895541--------
Staphylococcus debuckiiNZ_CP033460.12,691,8502,6002,8722,192
Mycoplasma mycoidesNZ_CP001668.11,084,5869006,0793,988
Staphylococcus haemolyticusNZ_CP013911.12,549,3382,5092,5151,873
Rathayibacter tanacetiNZ_CP047186.13,214,1203,044935905
Rathayibacter festucaeNZ_CP047180.14,219,9973,859914877
Pasteurella canisNZ_CP085791.12,298,7912,1832,7982,066
Staphylococcus aureusNC_007795.12,821,3612,8723,4542,515
Moraxella bovisCP030241.12,839,9132,8811,9911,593
Pseudomonas aeruginosaNC_002516.26,264,4045,6971,1821,045
Pseudomonas brassicacearumNZ_CP034725.16,738,5446,0231,4591,256
Psychrobacter alimentariusCP014945.13,332,5392,7422,2761,859
Pseudomonas amygdaliNZ_CP042804.16,133,5585,4391,6601,419
Pseudomonas adelgestsugasNZ_CP026512.11,835,5989041,7941,492
Acetobacter ascendensNZ_CP021524.12,901,8462,6822,0281,721
Mycoplasma capricolumNC_007633.11,010,0238786,9944,336
Pasteurella atlanticaNZ_CP074346.12,301,6492,2093,1752,320
Pasteurella canisCP083262.12,301,0942,1942,7142,031
Shewanella aestuariiCP050313.14,029,2103,5061,8911,578
Shewanella aestuariiNZ_CP050313.14,029,2103,5101,8901,575
Pasteurella dagmatisLT906448.12,287,2132,0882,5562,008


Viewing all articles
Browse latest Browse all 3572

Trending Articles