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APDX SBC SARS-CoV-2

August 17, 2023, 8:14 am

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This is an appendix to: Small Brains Considered - 15

Full-Genome Table (RNA)
Link and genome info: LC542976.1
Severe acute respiratory syndrome coronavirus 2 TKYE6968_2020 RNA
complete genome

Nucleotide ('A','C','G', 'U') Count: 29,903
Atom	Atom Count	Percent
Carbon	134,429	32.4207
Hydrogen	139,919	33.7447
Nitrogen	109,747	26.4680
Oxygen	30,545	7.3666
Totals	414,640	-----

Tatabox Table
Nucleotide count: 14,873
Atom	Atom Count	Percent
Carbon	66,808	32.4487
Hydrogen	69,394	33.7047
Nitrogen	54,280	26.3638
Oxygen	15,406	7.4827
Totals	205,888	-----

Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5
Atom	Atom Count	Percent
Carbon	66,786	32.4486
Hydrogen	69,372	33.7050
Nitrogen	54,264	26.3647
Oxygen	15,399	7.4817
Totals	205,821	-----

Full-Genome Table (RNA)
Link and genome info: MT039874.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/CHN/IME-HZ01/2020
complete genome

Nucleotide ('A','C','G', 'U') Count: 29,858
Atom	Atom Count	Percent
Carbon	134,209	32.4192
Hydrogen	139,701	33.7458
Nitrogen	109,539	26.4600
Oxygen	30,531	7.3750
Totals	413,980	-----

Tatabox Table
Nucleotide count: 14,873
Atom	Atom Count	Percent
Carbon	66,808	32.4484
Hydrogen	69,396	33.7054
Nitrogen	54,282	26.3646
Oxygen	15,404	7.4817
Totals	205,890	-----

Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5
Atom	Atom Count	Percent
Carbon	66,786	32.4483
Hydrogen	69,374	33.7057
Nitrogen	54,266	26.3654
Oxygen	15,397	7.4807
Totals	205,823	-----

Full-Genome Table (RNA)
Link and genome info: MT240479.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/PAK/Gilgit1/2020
complete genome

Nucleotide ('A','C','G', 'U') Count: 29,836
Atom	Atom Count	Percent
Carbon	134,111	32.4199
Hydrogen	139,590	33.7444
Nitrogen	109,452	26.4588
Oxygen	30,516	7.3769
Totals	413,669	-----

Tatabox Table
Nucleotide count: 14,873
Atom	Atom Count	Percent
Carbon	66,807	32.4487
Hydrogen	69,394	33.7052
Nitrogen	54,278	26.3633
Oxygen	15,406	7.4828
Totals	205,885	-----

Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5
Atom	Atom Count	Percent
Carbon	66,785	32.4486
Hydrogen	69,372	33.7055
Nitrogen	54,262	26.3641
Oxygen	15,399	7.4819
Totals	205,818	-----

Full-Genome Table (RNA)
Link and genome info: MT259268.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WA-UW276/2020
complete genome

Nucleotide ('A','C','G', 'U') Count: 29,758
'N' Unknown Count: 1
Atom	Atom Count	Percent
Carbon	133,785	32.4207
Hydrogen	139,241	33.7429
Nitrogen	109,231	26.4704
Oxygen	30,396	7.3660
Totals	412,653	-----

Tatabox Table
Nucleotide count: 14,873
Atom	Atom Count	Percent
Carbon	66,808	32.4486
Hydrogen	69,395	33.7051
Nitrogen	54,281	26.3642
Oxygen	15,405	7.4822
Totals	205,889	-----

Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5
Atom	Atom Count	Percent
Carbon	66,786	32.4484
Hydrogen	69,373	33.7053
Nitrogen	54,265	26.3650
Oxygen	15,398	7.4812
Totals	205,822	-----

Full-Genome Table (RNA)
Link and genome info: MT246489.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WA-UW232/2020
complete genome

Nucleotide ('A','C','G', 'U') Count: 29,863
'N' Unknown Count: 1
Atom	Atom Count	Percent
Carbon	134,258	32.4211
Hydrogen	139,734	33.7435
Nitrogen	109,620	26.4714
Oxygen	30,495	7.3640
Totals	414,107	-----

Tatabox Table
Nucleotide count: 14,873
Atom	Atom Count	Percent
Carbon	66,808	32.4486
Hydrogen	69,395	33.7051
Nitrogen	54,281	26.3642
Oxygen	15,405	7.4822
Totals	205,889	-----

Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5
Atom	Atom Count	Percent
Carbon	66,786	32.4484
Hydrogen	69,373	33.7053
Nitrogen	54,265	26.3650
Oxygen	15,398	7.4812
Totals	205,822	-----

Full-Genome Table (RNA)
Link and genome info: MT253700.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/CHN/HZ-481/2020
complete genome

Nucleotide ('A','C','G', 'U') Count: 29,781
Atom	Atom Count	Percent
Carbon	133,868	32.4194
Hydrogen	139,340	33.7445
Nitrogen	109,266	26.4614
Oxygen	30,452	7.3747
Totals	412,926	-----

Tatabox Table
Nucleotide count: 14,873
Atom	Atom Count	Percent
Carbon	66,808	32.4484
Hydrogen	69,396	33.7054
Nitrogen	54,282	26.3646
Oxygen	15,404	7.4817
Totals	205,890	-----

Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5
Atom	Atom Count	Percent
Carbon	66,786	32.4483
Hydrogen	69,374	33.7057
Nitrogen	54,266	26.3654
Oxygen	15,397	7.4807
Totals	205,823	-----

Full-Genome Table (RNA)
Link and genome info: MT039887.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WI-CDC-WI1/2020
complete genome

Nucleotide ('A','C','G', 'U') Count: 29,879
Atom	Atom Count	Percent
Carbon	134,311	32.4198
Hydrogen	139,802	33.7452
Nitrogen	109,634	26.4633
Oxygen	30,540	7.3717
Totals	414,287	-----

Tatabox Table
Nucleotide count: 14,870
Atom	Atom Count	Percent
Carbon	66,795	32.4482
Hydrogen	69,383	33.7054
Nitrogen	54,273	26.3652
Oxygen	15,400	7.4811
Totals	205,851	-----

Clean Tatabox Table
Nucleotide count: 14,865
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5
Atom	Atom Count	Percent
Carbon	66,773	32.4481
Hydrogen	69,361	33.7057
Nitrogen	54,257	26.3660
Oxygen	15,393	7.4802
Totals	205,784	-----

Full-Genome Table (RNA)
Link and genome info: MT259271.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WA-UW279/2020
complete genome

Nucleotide ('A','C','G', 'U') Count: 29,864
Atom	Atom Count	Percent
Carbon	134,237	32.4195
Hydrogen	139,727	33.7453
Nitrogen	109,561	26.4600
Oxygen	30,538	7.3752
Totals	414,063	-----

Tatabox Table
Nucleotide count: 14,873
Atom	Atom Count	Percent
Carbon	66,808	32.4484
Hydrogen	69,396	33.7054
Nitrogen	54,282	26.3646
Oxygen	15,404	7.4817
Totals	205,890	-----

Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5
Atom	Atom Count	Percent
Carbon	66,786	32.4483
Hydrogen	69,374	33.7057
Nitrogen	54,266	26.3654
Oxygen	15,397	7.4807
Totals	205,823	-----

Full-Genome Table (RNA)
Link and genome info: MT159716.2
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CDC-CruiseA-18/2020
complete genome

Nucleotide ('A','C','G', 'U') Count: 29,867
Atom	Atom Count	Percent
Carbon	134,257	32.4200
Hydrogen	139,747	33.7457
Nitrogen	109,591	26.4637
Oxygen	30,523	7.3706
Totals	414,118	-----

Tatabox Table
Nucleotide count: 14,873
Atom	Atom Count	Percent
Carbon	66,807	32.4485
Hydrogen	69,395	33.7055
Nitrogen	54,279	26.3636
Oxygen	15,405	7.4823
Totals	205,886	-----

Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5
Atom	Atom Count	Percent
Carbon	66,785	32.4484
Hydrogen	69,373	33.7058
Nitrogen	54,263	26.3644
Oxygen	15,398	7.4813
Totals	205,819	-----

Full-Genome Table (RNA)
Link and genome info: MT259253.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WA-UW261/2020
complete genome

Nucleotide ('A','C','G', 'U') Count: 29,813
Atom	Atom Count	Percent
Carbon	134,028	32.4205
Hydrogen	139,498	33.7437
Nitrogen	109,424	26.4690
Oxygen	30,455	7.3669
Totals	413,405	-----

Tatabox Table
Nucleotide count: 14,873
Atom	Atom Count	Percent
Carbon	66,808	32.4484
Hydrogen	69,395	33.7049
Nitrogen	54,281	26.3641
Oxygen	15,406	7.4826
Totals	205,890	-----

Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5
Atom	Atom Count	Percent
Carbon	66,786	32.4483
Hydrogen	69,373	33.7052
Nitrogen	54,265	26.3649
Oxygen	15,399	7.4817
Totals	205,823	-----

Full-Genome Table (RNA)
Link and genome info: MT259251.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WA-UW259/2020
complete genome

Nucleotide ('A','C','G', 'U') Count: 29,883
'N' Unknown Count: 1
Atom	Atom Count	Percent
Carbon	134,343	32.4213
Hydrogen	139,822	33.7435
Nitrogen	109,678	26.4688
Oxygen	30,524	7.3664
Totals	414,367	-----

Tatabox Table
Nucleotide count: 14,873
Atom	Atom Count	Percent
Carbon	66,808	32.4486
Hydrogen	69,395	33.7051
Nitrogen	54,281	26.3642
Oxygen	15,405	7.4822
Totals	205,889	-----

Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5
Atom	Atom Count	Percent
Carbon	66,786	32.4484
Hydrogen	69,373	33.7053
Nitrogen	54,265	26.3650
Oxygen	15,398	7.4812
Totals	205,822	-----

Full-Genome Table (RNA)
Link and genome info: MT252695.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WA-UW96/2020
complete genome

Nucleotide ('A','C','G', 'U') Count: 29,809
'N' Unknown Count: 10
Atom	Atom Count	Percent
Carbon	134,001	32.4204
Hydrogen	139,469	33.7433
Nitrogen	109,381	26.4638
Oxygen	30,472	7.3724
Totals	413,323	-----

Tatabox Table
Nucleotide count: 14,873
Atom	Atom Count	Percent
Carbon	66,808	32.4486
Hydrogen	69,395	33.7051
Nitrogen	54,281	26.3642
Oxygen	15,405	7.4822
Totals	205,889	-----

Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5
Atom	Atom Count	Percent
Carbon	66,786	32.4484
Hydrogen	69,373	33.7053
Nitrogen	54,265	26.3650
Oxygen	15,398	7.4812
Totals	205,822	-----

Full-Genome Table (RNA)
Link and genome info: MT263413.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WA-UW333/2020
complete genome

Nucleotide ('A','C','G', 'U') Count: 29,857
'N' Unknown Count: 5
Atom	Atom Count	Percent
Carbon	134,214	32.4206
Hydrogen	139,693	33.7441
Nitrogen	109,551	26.4631
Oxygen	30,519	7.3721
Totals	413,977	-----

Tatabox Table
Nucleotide count: 14,873
Atom	Atom Count	Percent
Carbon	66,808	32.4486
Hydrogen	69,395	33.7051
Nitrogen	54,281	26.3642
Oxygen	15,405	7.4822
Totals	205,889	-----

Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5
Atom	Atom Count	Percent
Carbon	66,786	32.4484
Hydrogen	69,373	33.7053
Nitrogen	54,265	26.3650
Oxygen	15,398	7.4812
Totals	205,822	-----

Full-Genome Table (RNA)
Link and genome info: MT066176.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/NTU02/TWN/human/2020
complete genome

Nucleotide ('A','C','G', 'U') Count: 29,870
Atom	Atom Count	Percent
Carbon	134,264	32.4194
Hydrogen	139,755	33.7453
Nitrogen	109,583	26.4599
Oxygen	30,545	7.3754
Totals	414,147	-----

Tatabox Table
Nucleotide count: 14,873
Atom	Atom Count	Percent
Carbon	66,808	32.4484
Hydrogen	69,395	33.7049
Nitrogen	54,281	26.3641
Oxygen	15,406	7.4826
Totals	205,890	-----

Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5
Atom	Atom Count	Percent
Carbon	66,786	32.4483
Hydrogen	69,373	33.7052
Nitrogen	54,265	26.3649
Oxygen	15,399	7.4817
Totals	205,823	-----

Full-Genome Table (RNA)
Link and genome info: MT263412.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WA-UW332/2020
complete genome

Nucleotide ('A','C','G', 'U') Count: 29,821
'N' Unknown Count: 8
Atom	Atom Count	Percent
Carbon	134,062	32.4205
Hydrogen	139,533	33.7436
Nitrogen	109,447	26.4678
Oxygen	30,468	7.3681
Totals	413,510	-----

Tatabox Table
Nucleotide count: 14,873
Atom	Atom Count	Percent
Carbon	66,808	32.4486
Hydrogen	69,395	33.7051
Nitrogen	54,281	26.3642
Oxygen	15,405	7.4822
Totals	205,889	-----

Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5
Atom	Atom Count	Percent
Carbon	66,786	32.4484
Hydrogen	69,373	33.7053
Nitrogen	54,265	26.3650
Oxygen	15,398	7.4812
Totals	205,822	-----

Full-Genome Table (RNA)
Link and genome info: MT114416.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/HKG/HKU-907a/2020
complete genome

Nucleotide ('A','C','G', 'U') Count: 29,867
Atom	Atom Count	Percent
Carbon	134,262	32.4202
Hydrogen	139,748	33.7449
Nitrogen	109,602	26.4655
Oxygen	30,519	7.3694
Totals	414,131	-----

Tatabox Table
Nucleotide count: 14,873
Atom	Atom Count	Percent
Carbon	66,808	32.4487
Hydrogen	69,394	33.7047
Nitrogen	54,280	26.3638
Oxygen	15,406	7.4827
Totals	205,888	-----

Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5
Atom	Atom Count	Percent
Carbon	66,786	32.4486
Hydrogen	69,372	33.7050
Nitrogen	54,264	26.3647
Oxygen	15,399	7.4817
Totals	205,821	-----

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