Quantcast
Channel: Dredd Blog
Viewing all articles
Browse latest Browse all 3572

APDX SBC TOXO

$
0
0

This is an appendix to: Small Brains Considered - 15





Full-Genome Table (DNA)
Link and genome info: WOEV01000427.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_207
whole genome shotgun sequence


Nucleotide ('A','C','G', 'T') Count: 15,600
'N' Unknown Count: 1

AtomAtom CountPercent
Carbon74,09632.1747
Hydrogen82,10635.6528
Nitrogen57,87425.1306
Oxygen16,2177.0419
Totals230,293-----



Tatabox Table
Nucleotide count: 8,058

AtomAtom CountPercent
Carbon38,12132.1588
Hydrogen42,33735.7154
Nitrogen29,81125.1485
Oxygen8,2716.9774
Totals118,540-----



Clean Tatabox Table
Nucleotide count: 8,058

AtomAtom CountPercent
Carbon38,12132.1588
Hydrogen42,33735.7154
Nitrogen29,81125.1485
Oxygen8,2716.9774
Totals118,540-----



Full-Genome Table (DNA)
Link and genome info: WOEV01000417.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_196
whole genome shotgun sequence


Nucleotide ('A','C','G', 'T') Count: 9,298
'N' Unknown Count: 21

AtomAtom CountPercent
Carbon43,66932.0843
Hydrogen48,34835.5221
Nitrogen35,27425.9164
Oxygen8,8166.4773
Totals136,107-----



Tatabox Table
Nucleotide count: 3,638
'N' Unknown Count: 2

AtomAtom CountPercent
Carbon17,04732.0939
Hydrogen18,90035.5825
Nitrogen13,77425.9319
Oxygen3,3956.3917
Totals53,116-----



Clean Tatabox Table
Nucleotide count: 3,637
'N' Unknown Count: 3
'Chimera' Nucleotide Count: 1

AtomAtom CountPercent
Carbon17,04232.0936
Hydrogen18,89535.5831
Nitrogen13,76925.9298
Oxygen3,3956.3935
Totals53,101-----



Full-Genome Table (DNA)
Link and genome info: WOEV01000430.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_192
whole genome shotgun sequence


Nucleotide ('A','C','G', 'T') Count: 17,813
'N' Unknown Count: 309

AtomAtom CountPercent
Carbon83,60432.1201
Hydrogen92,99935.7295
Nitrogen66,34125.4877
Oxygen17,3426.6627
Totals260,286-----



Tatabox Table
Nucleotide count: 447
'N' Unknown Count: 6

AtomAtom CountPercent
Carbon2,13132.3320
Hydrogen2,36735.9126
Nitrogen1,63124.7459
Oxygen4627.0096
Totals6,591-----



Clean Tatabox Table
Nucleotide count: 447
'N' Unknown Count: 6

AtomAtom CountPercent
Carbon2,13132.3320
Hydrogen2,36735.9126
Nitrogen1,63124.7459
Oxygen4627.0096
Totals6,591-----




Full-Genome Table (DNA)
Link and genome info: WOEV01000426.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_134
whole genome shotgun sequence


Nucleotide ('A','C','G', 'T') Count: 15,108
'N' Unknown Count: 142

AtomAtom CountPercent
Carbon70,97732.0990
Hydrogen78,75835.6179
Nitrogen56,76025.6694
Oxygen14,6246.6136
Totals221,119-----



Tatabox Table
Nucleotide count: 9,108
'N' Unknown Count: 87

AtomAtom CountPercent
Carbon42,86332.1112
Hydrogen47,50035.5851
Nitrogen34,30625.7007
Oxygen8,8146.6031
Totals133,483-----



Clean Tatabox Table
Nucleotide count: 9,108
'N' Unknown Count: 87

AtomAtom CountPercent
Carbon42,86332.1112
Hydrogen47,50035.5851
Nitrogen34,30625.7007
Oxygen8,8146.6031
Totals133,483-----



Full-Genome Table (DNA)
Link and genome info: WOEV01000418.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_24
whole genome shotgun sequence


Nucleotide ('A','C','G', 'T') Count: 9,526
'N' Unknown Count: 48

AtomAtom CountPercent
Carbon45,11232.1448
Hydrogen50,04535.6598
Nitrogen35,34925.1881
Oxygen9,8347.0073
Totals140,340-----



Tatabox Table
Nucleotide count: 4,567
'N' Unknown Count: 15

AtomAtom CountPercent
Carbon21,58632.1024
Hydrogen23,86035.4843
Nitrogen17,26225.6718
Oxygen4,5336.7414
Totals67,241-----



Clean Tatabox Table
Nucleotide count: 4,566
'N' Unknown Count: 16
'Chimera' Nucleotide Count: 1

AtomAtom CountPercent
Carbon21,58132.1022
Hydrogen23,85535.4848
Nitrogen17,25725.6701
Oxygen4,5336.7429
Totals67,226-----




Full-Genome Table (DNA)
Link and genome info: WOEV01000388.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_336
whole genome shotgun sequence


Nucleotide ('A','C','G', 'T') Count: 3,178
'N' Unknown Count: 28

AtomAtom CountPercent
Carbon14,98932.0497
Hydrogen16,65035.6013
Nitrogen11,80825.2480
Oxygen3,3217.1010
Totals46,768-----



Tatabox Table
Nucleotide count: 1,550
'N' Unknown Count: 8

AtomAtom CountPercent
Carbon7,30632.0523
Hydrogen8,14135.7155
Nitrogen5,68924.9583
Oxygen1,6587.2738
Totals22,794-----



Clean Tatabox Table
Nucleotide count: 1,549
'N' Unknown Count: 9
'Chimera' Nucleotide Count: 1

AtomAtom CountPercent
Carbon7,30132.0529
Hydrogen8,13635.7187
Nitrogen5,68424.9539
Oxygen1,6577.2746
Totals22,778-----



Full-Genome Table (DNA)
Link and genome info: WOEV01000401.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_186
whole genome shotgun sequence


Nucleotide ('A','C','G', 'T') Count: 4,173
'N' Unknown Count: 25

AtomAtom CountPercent
Carbon19,77232.2271
Hydrogen21,84935.6125
Nitrogen15,72725.6340
Oxygen4,0046.5263
Totals61,352-----



Tatabox Table
Nucleotide count: 299

AtomAtom CountPercent
Carbon1,42632.2624
Hydrogen1,56235.3394
Nitrogen1,15626.1538
Oxygen2766.2443
Totals4,420-----



Clean Tatabox Table
Nucleotide count: 297
'N' Unknown Count: 2
'Chimera' Nucleotide Count: 2

AtomAtom CountPercent
Carbon1,41732.2632
Hydrogen1,55235.3370
Nitrogen1,14826.1384
Oxygen2756.2614
Totals4,392-----


Viewing all articles
Browse latest Browse all 3572

Trending Articles